RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MAGEB2O15479 319 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 CSDE1O75534 798 aaKnown RBP17.54■□□□□ 0.4
NME3-211ENST00000568561 SP100P23497 879 aaPredicted RBP17.54■□□□□ 0.4
NME3-211ENST00000568561 GNA11P29992 359 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 CIITAP33076 1130 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 CCT2P78371 535 aaKnown RBP17.54■□□□□ 0.4
NME3-211ENST00000568561 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
NME3-211ENST00000568561 NTRK3Q16288 839 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 CLLU1OSQ5K130 101 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 TRIM67Q6ZTA4 783 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 MRPS27Q92552 414 aaKnown RBP17.54■□□□□ 0.4
NME3-211ENST00000568561 KCNB2Q92953 911 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 PHF7Q9BWX1 381 aaPredicted RBP17.54■□□□□ 0.4
NME3-211ENST00000568561 TMEM150BA6NC51 233 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 RPS6KB1P23443 525 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
NME3-211ENST00000568561 HSPA4P34932 840 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 TECP42680 631 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 GPC3P51654 580 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 ZXDAP98168 799 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 DRP2Q13474 957 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 CBX2Q14781 532 aaPredicted RBP17.53■□□□□ 0.4
NME3-211ENST00000568561 MCTP2Q6DN12 878 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 KCNT2Q6UVM3 1135 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 ECHDC2Q86YB7 292 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 ABI1Q8IZP0 508 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 LRRC43Q8N309 656 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 CCDC148Q8NFR7 591 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 SUSD6Q92537 303 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 ZNF558Q96NG5 402 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 UNC45AQ9H3U1 944 aa17.53■□□□□ 0.4
NME3-211ENST00000568561 GAS7O60861 476 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
NME3-211ENST00000568561 TMOD1P28289 359 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 PLCB3Q01970 1234 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 LRCH2Q5VUJ6 765 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 ANKRD54Q6NXT1 300 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 PRSS33Q8NF86 280 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 BICD2Q8TD16 824 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 HELQQ8TDG4 1101 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 SLC5A5Q92911 643 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 PBXIP1Q96AQ6 731 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 PHOX2BQ99453 314 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 CDCA3Q99618 268 aaPredicted RBP17.52■□□□□ 0.4
NME3-211ENST00000568561 SH2D3AQ9BRG2 576 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 RNF26Q9BY78 433 aaPredicted RBP17.52■□□□□ 0.4
NME3-211ENST00000568561 LZTS1Q9Y250 596 aa17.52■□□□□ 0.4
NME3-211ENST00000568561 HOXA2O43364 376 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 DARSP14868 501 aaKnown RBP17.51■□□□□ 0.39
NME3-211ENST00000568561 ATF7P17544 494 aaPredicted RBP17.51■□□□□ 0.39
NME3-211ENST00000568561 TBC1D8BQ0IIM8 1120 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 KCNC3Q14003 757 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 MTERF2Q49AM1 385 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 IER5LQ5T953 404 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 SYCE2Q6PIF2 218 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 FAM43BQ6ZT52 329 aaPredicted RBP17.51■□□□□ 0.39
NME3-211ENST00000568561 TMC7Q7Z402 723 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 NLRP7Q8WX94 980 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 TEKT3Q9BXF9 490 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 KCNH6Q9H252 994 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 NRBP2Q9NSY0 501 aa17.51■□□□□ 0.39
NME3-211ENST00000568561 SEPT9Q9UHD8 586 aaPredicted RBP17.51■□□□□ 0.39
NME3-211ENST00000568561 PUF60Q9UHX1 559 aaKnown RBP17.51■□□□□ 0.39
NME3-211ENST00000568561 CACNA1HO95180 2353 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 TDP2O95551 362 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 SRGAP2BP0DMP2 458 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 IFNAR1P17181 557 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 CA8P35219 290 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 PPM1AP35813 382 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 NLRP5P59047 1200 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 LONRF3Q496Y0 759 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 PDE12Q6L8Q7 609 aaKnown RBP17.5■□□□□ 0.39
NME3-211ENST00000568561 ZNF598Q86UK7 904 aaKnown RBP17.5■□□□□ 0.39
NME3-211ENST00000568561 TBCKQ8TEA7 893 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 RIT2Q99578 217 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 AGXT2Q9BYV1 514 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 S1PR5Q9H228 398 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 SPG21Q9NZD8 308 aa17.5■□□□□ 0.39
NME3-211ENST00000568561 NT5C1B-RDH14C9J2C7 533 aa17.49■□□□□ 0.39
NME3-211ENST00000568561 PDIA3P30101 505 aaKnown RBP17.49■□□□□ 0.39
NME3-211ENST00000568561 JAK3P52333 1124 aa17.49■□□□□ 0.39
NME3-211ENST00000568561 MIER3Q7Z3K6 550 aa17.49■□□□□ 0.39
NME3-211ENST00000568561 SUGP1Q8IWZ8 645 aaKnown RBP17.49■□□□□ 0.39
NME3-211ENST00000568561 SLC39A11Q8N1S5 342 aa17.49■□□□□ 0.39
NME3-211ENST00000568561 TSHZ2Q9NRE2 1034 aa17.49■□□□□ 0.39
NME3-211ENST00000568561 MYO10Q9HD67 2058 aa17.49■□□□□ 0.39
NME3-211ENST00000568561 A0A0U1RQF3 1178 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 FSD2A1L4K1 749 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 PSMD10O75832 226 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 SFNP31947 248 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 KRT17Q04695 432 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 TARBP2Q15633 366 aaKnown RBP17.48■□□□□ 0.39
NME3-211ENST00000568561 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 BMP8AQ7Z5Y6 402 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 LPPQ93052 612 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 AIFM3Q96NN9 605 aa17.48■□□□□ 0.39
NME3-211ENST00000568561 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms