RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 KANK3Q6NY19 840 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 SH3RF1Q7Z6J0 888 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 DAW1Q8N136 415 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 NME8Q8N427 588 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 CAGE1Q8TC20 777 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 PRPF31Q8WWY3 499 aaKnown RBP17.42■□□□□ 0.38
SPG7-218ENST00000568205 PSPC1Q8WXF1 523 aaKnown RBP17.42■□□□□ 0.38
SPG7-218ENST00000568205 DDX12PQ92771 950 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 KIFAP3Q92845 792 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 CCDC34Q96HJ3 373 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 DRC1Q96MC2 740 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
SPG7-218ENST00000568205 TRIM9Q9C026 710 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 POLD4Q9HCU8 107 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 ODF2LQ9ULJ1 636 aa17.42■□□□□ 0.38
SPG7-218ENST00000568205 CAND2O75155 1236 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 TBCAO75347 108 aaKnown RBP17.41■□□□□ 0.38
SPG7-218ENST00000568205 VTNP04004 478 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 MRPS6P82932 125 aaKnown RBP17.41■□□□□ 0.38
SPG7-218ENST00000568205 RBL2Q08999 1139 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 BFSP2Q13515 415 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 CNNM4Q6P4Q7 775 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 GPT2Q8TD30 523 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 ASAP3Q8TDY4 903 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 DNAJC19Q96DA6 116 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 C7orf25Q9BPX7 421 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 COL4A3BPQ9Y5P4 624 aa17.41■□□□□ 0.38
SPG7-218ENST00000568205 RSPH10B2B2RC85 870 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
SPG7-218ENST00000568205 MBD3O95983 291 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 MYL1P05976 194 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 CTSHP09668 335 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 RSPH10BP0C881 870 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 PTMSP20962 102 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 GLRA2P23416 452 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 ASIC1P78348 528 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 TMEM62Q0P6H9 643 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 LAMTOR4Q0VGL1 99 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 CUL4BQ13620 913 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 MXD4Q14582 209 aaPredicted RBP17.4■□□□□ 0.38
SPG7-218ENST00000568205 RHPN2Q8IUC4 686 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 BSNDQ8WZ55 320 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 BLZF1Q9H2G9 400 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 HIPK3Q9H422 1215 aa17.4■□□□□ 0.38
SPG7-218ENST00000568205 PRDM5Q9NQX1 630 aaPredicted RBP17.4■□□□□ 0.38
SPG7-218ENST00000568205 KIAA0355O15063 1070 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 ASAP2O43150 1006 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 FAM13AO94988 1023 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 CKBP12277 381 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 SELPP16109 830 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 CASP1P29466 404 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 GPC3P51654 580 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 ZNF131P52739 623 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 POSTNQ15063 836 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 KIZQ2M2Z5 673 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 ZNF618Q5T7W0 954 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 KSR1Q8IVT5 923 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 ELOA2Q8IYF1 753 aaPredicted RBP17.39■□□□□ 0.37
SPG7-218ENST00000568205 C7orf61Q8IZ16 206 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 ZNF710Q8N1W2 664 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 PARVGQ9HBI0 331 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 HOOK1Q9UJC3 728 aaKnown RBP17.39■□□□□ 0.37
SPG7-218ENST00000568205 ARID2Q68CP9 1835 aa17.39■□□□□ 0.37
SPG7-218ENST00000568205 SFI1A8K8P3 1242 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 M0QZ92 97 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 EVI5O60447 810 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 GPR32O75388 356 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 PLS3P13797 630 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 IDEP14735 1019 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 NLRP11P59045 1033 aaKnown RBP17.38■□□□□ 0.37
SPG7-218ENST00000568205 MDM2Q00987 491 aaPredicted RBP17.38■□□□□ 0.37
SPG7-218ENST00000568205 MGAT3Q09327 533 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 CAPSQ13938 189 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 TFDP1Q14186 410 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 PPP2R5AQ15172 486 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 FAM26DQ5JW98 314 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 TRAF7Q6Q0C0 670 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 ZNF410Q86VK4 478 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 ZNF668Q96K58 619 aaPredicted RBP17.38■□□□□ 0.37
SPG7-218ENST00000568205 IFT74Q96LB3 600 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 NLRP4Q96MN2 994 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 SCLT1Q96NL6 688 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 CELF4Q9BZC1 486 aaKnown RBP17.38■□□□□ 0.37
SPG7-218ENST00000568205 PPP1R12CQ9BZL4 782 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 C17orf75Q9HAS0 396 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 TRPV2Q9Y5S1 764 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 CDY2AQ9Y6F7 541 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 UMODL1Q5DID0 1318 aa17.38■□□□□ 0.37
SPG7-218ENST00000568205 FRMD3A2A2Y4 597 aa17.37■□□□□ 0.37
SPG7-218ENST00000568205 TRIM43BA6NCK2 446 aa17.37■□□□□ 0.37
SPG7-218ENST00000568205 CHRNA1P02708 482 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms