RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 MAN2A1Q16706 1144 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 KNOP1Q1ED39 458 aaKnown RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 LRRC55Q6ZSA7 311 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 ZNF507Q8TCN5 953 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 PIGOQ8TEQ8 1089 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 BADQ92934 168 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 ATP6V0A1Q93050 837 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 CCDC43Q96MW1 224 aaKnown RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 KCTD10Q9H3F6 313 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 THEGQ9P2T0 379 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 TRAF3IP3Q9Y228 551 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 ARIH1Q9Y4X5 557 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 LCTP09848 1927 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 COBLO75128 1261 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 PSAPP07602 524 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 GCLCP48506 637 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 ALDH5A1P51649 535 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 PPP2R3AQ06190 1150 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 CCL14Q16627 93 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 NFIL3Q16649 462 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 FIGNQ5HY92 759 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 OTUD6AQ7L8S5 288 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 FAM133AQ8N9E0 248 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 TC2NQ8N9U0 490 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 BANK1Q8NDB2 785 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 GOLGA5Q8TBA6 731 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 SNX27Q96L92 541 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 NECAB3Q96P71 396 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 ERGIC2Q96RQ1 377 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 BAG1Q99933 345 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 NOC4LQ9BVI4 516 aaKnown RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 C1QTNF1Q9BXJ1 281 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 MRPL44Q9H9J2 332 aaKnown RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
COMMD4-221ENST00000567935 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
COMMD4-221ENST00000567935 CETN3O15182 167 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 PEX10O60683 326 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 ATP9AO75110 1047 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 MFAP3LO75121 409 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 CNMDO75829 334 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 RARRES1P49788 294 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 LRRC41Q15345 812 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 KCNV1Q6PIU1 500 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 PADI6Q6TGC4 694 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 CREBRFQ8IUR6 639 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 JPH1Q9HDC5 661 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-221ENST00000567935 PRDM5Q9NQX1 630 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-221ENST00000567935 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
COMMD4-221ENST00000567935 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-221ENST00000567935 SLC9A2Q9UBY0 812 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 ATP11BQ9Y2G3 1177 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 HCN4Q9Y3Q4 1203 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
COMMD4-221ENST00000567935 GOLGA6L9A6NEM1 432 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 RGS20O76081 388 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 CCNE2O96020 404 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 TGFB3P10600 412 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 XRCC5P13010 732 aaKnown RBP16.07■□□□□ 0.16
COMMD4-221ENST00000567935 FECHP22830 423 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 YWHABP31946 246 aaKnown RBP16.07■□□□□ 0.16
COMMD4-221ENST00000567935 TERF1P54274 439 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 CCNA1P78396 465 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-221ENST00000567935 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 VWA3BQ502W6 1294 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 DRC1Q96MC2 740 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 PURBQ96QR8 312 aaKnown RBP16.07■□□□□ 0.16
COMMD4-221ENST00000567935 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 KCNG1Q9UIX4 513 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 MYH11P35749 1972 aa16.07■□□□□ 0.16
COMMD4-221ENST00000567935 NCOR1O75376 2440 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 PES1O00541 588 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 SLC16A3O15427 465 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 ZSCAN12O43309 604 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 GCNT3O95395 438 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 GYPCP04921 128 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 ERCC3P19447 782 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 ABCD1P33897 745 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 SNRPFP62306 86 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 MRPS5P82675 430 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 RBL2Q08999 1139 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 MYBPC2Q14324 1141 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 NEDD9Q14511 834 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 KCTD2Q14681 263 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 CCDC40Q4G0X9 1142 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 MIIPQ5JXC2 388 aa16.06■□□□□ 0.16
COMMD4-221ENST00000567935 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 ALYREFQ86V81 257 aaKnown RBP16.06■□□□□ 0.16
COMMD4-221ENST00000567935 CCAR2Q8N163 923 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms