RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 PPP2R3CQ969Q6 453 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 PABPC5Q96DU9 382 aaKnown RBP11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 PPP1R16BQ96T49 567 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 ALG13Q9NP73 1137 aaKnown RBP11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 DACT1Q9NYF0 836 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 SUCLA2Q9P2R7 463 aaPredicted RBP11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 SEPT9Q9UHD8 586 aaPredicted RBP11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 PCDHA12Q9UN75 941 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 PPME1Q9Y570 386 aa11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 MRPL42Q9Y6G3 142 aaKnown RBP11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 SPTBN5Q9NRC6 3674 aaKnown RBP11.38□□□□□ -0.59
HMGN2P40-201ENST00000566875 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 XIRP2A4UGR9 3374 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 EML1O00423 815 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 SLC37A4O43826 429 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 KCNA5P22460 613 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 SAFBQ15424 915 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 PAN2Q504Q3 1202 aaKnown RBP11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 EP400NLQ6ZTU2 488 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 ANO5Q75V66 913 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 NSUN7Q8NE18 718 aaKnown RBP11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 HAS1Q92839 578 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 ZSCAN31Q96LW9 406 aaPredicted RBP11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 ZSWIM4Q9H7M6 989 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 FAM50BQ9Y247 325 aa11.37□□□□□ -0.59
HMGN2P40-201ENST00000566875 REV3LO60673 3130 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 A0A0U1RQF3 1178 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 TBKBP1A7MCY6 615 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 ASAP2O43150 1006 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 DTNBO60941 627 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 MMP1P03956 469 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 SKIP12755 728 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 UBE3AQ05086 875 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 NR5A1Q13285 461 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 C4orf19Q8IY42 314 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 ABI1Q8IZP0 508 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 NEK9Q8TD19 979 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 MICAL1Q8TDZ2 1067 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 SLC7A3Q8WY07 619 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 CEP170P1Q96L14 293 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 CEP89Q96ST8 783 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 LLPHQ9BRT6 129 aaKnown RBP11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 TMEM117Q9H0C3 514 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 CYP26B1Q9NR63 512 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 VAV3Q9UKW4 847 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 EVPLQ92817 2033 aa11.36□□□□□ -0.59
HMGN2P40-201ENST00000566875 A0A087WZ62 844 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 ABCB7O75027 752 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 SLITRK3O94933 977 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 ITGB1P05556 798 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 RFC5P40937 340 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 DRP2Q13474 957 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 CAMK1Q14012 370 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 COL19A1Q14993 1142 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 CTC1Q2NKJ3 1217 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 EARS2Q5JPH6 523 aaKnown RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 PTCRAQ6ISU1 281 aaPredicted RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 RHPN2Q8IUC4 686 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 TPH2Q8IWU9 490 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 DIS3L2Q8IYB7 885 aaKnown RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 ZNF668Q96K58 619 aaPredicted RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 NECAB3Q96P71 396 aaPredicted RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 SH2D3AQ9BRG2 576 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 FDXACB1Q9BRP7 624 aaPredicted RBP11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 IGFLR1Q9H665 355 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 CLDND1Q9NY35 253 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 PTPRSQ13332 1948 aa11.35□□□□□ -0.59
HMGN2P40-201ENST00000566875 TMEM150BA6NC51 233 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 GAS2O43903 313 aaKnown RBP11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 JAK2O60674 1132 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 LARGE1O95461 756 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 YWHABP31946 246 aaKnown RBP11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 GATMP50440 423 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 POLGP54098 1239 aaPredicted RBP11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 NPEPPSP55786 919 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 KRT17Q04695 432 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 HYAL1Q12794 435 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 ADAM15Q13444 863 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 CALCRLQ16602 461 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
HMGN2P40-201ENST00000566875 TCP11Q8WWU5 503 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms