RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 APBA3O96018 575 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 HOXD13P35453 343 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 ADCY2Q08462 1091 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 KNOP1Q1ED39 458 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 METTL14Q9HCE5 456 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 INTS9Q9NV88 658 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 SRP68Q9UHB9 627 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 PPP1R9AQ9ULJ8 1098 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 GOLGA6L10A0A0M3HER8 536 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 PDXKO00764 312 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 SLC16A3O15427 465 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 RGS16O15492 202 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 OAS1P00973 400 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 LDHCP07864 332 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 CASP5P51878 434 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 IFI35P80217 286 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 DIXDC1Q155Q3 683 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 JAMLQ86YT9 394 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 FAM212AQ96EL1 285 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 NAP1L4Q99733 375 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 ELAC2Q9BQ52 826 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 NSRP1Q9H0G5 558 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 DHX36Q9H2U1 1008 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 ERVK-5Q9HDB9 667 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 C15orf41Q9Y2V0 281 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 RPTORQ8N122 1335 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 CALUO43852 315 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-215ENST00000566843 PPP1R12BO60237 982 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-215ENST00000566843 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-215ENST00000566843 PAX7P23759 505 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 PTGIRP43119 386 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 SLMAPQ14BN4 828 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 GRIK5Q16478 980 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 SLC35G2Q8TBE7 412 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 GJA10Q969M2 543 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-215ENST00000566843 OSGEPQ9NPF4 335 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 GRHL1Q9NZI5 618 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 FRMPD2Q68DX3 1309 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-215ENST00000566843 POTEB3A0JP26 581 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 POTECB2RU33 542 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 SNHG28P0DPA3 235 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 LMNB1P20700 586 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 GBP1P32455 592 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 STAT1P42224 750 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 MAPK7Q13164 816 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 UBE2SQ16763 222 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 GALNTL6Q49A17 601 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 POTEBQ6S5H4 581 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 TBC1D31Q96DN5 1066 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 AGAP1Q9UPQ3 857 aa16.98■□□□□ 0.31
COMMD4-215ENST00000566843 PLIN4Q96Q06 1357 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 MARCH6O60337 910 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 AKAP3O75969 853 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 RPSAP08865 295 aaKnown RBP16.97■□□□□ 0.31
COMMD4-215ENST00000566843 NQO1P15559 274 aaKnown RBP16.97■□□□□ 0.31
COMMD4-215ENST00000566843 PLTPP55058 493 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 GIT2Q14161 759 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 SLC29A2Q14542 456 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 BMT2Q1RMZ1 405 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 TBC1D1Q86TI0 1168 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-215ENST00000566843 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 SLC35C1Q96A29 364 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 PRMT1Q99873 361 aaKnown RBP16.97■□□□□ 0.31
COMMD4-215ENST00000566843 TRIM6Q9C030 488 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-215ENST00000566843 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 RASAL2Q9UJF2 1139 aa16.97■□□□□ 0.31
COMMD4-215ENST00000566843 RGL2O15211 777 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 SNX3O60493 162 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 ANP32DO95626 131 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 CLTAP09496 248 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 RARAP10276 462 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 NCALDP61601 193 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 CNGA2Q16280 664 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 FBXO25Q8TCJ0 367 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
COMMD4-215ENST00000566843 GLG1Q92896 1179 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 STMN4Q9H169 189 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-215ENST00000566843 GOPCQ9HD26 462 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 ABCF3Q9NUQ8 709 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-215ENST00000566843 SNX24Q9Y343 169 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 TLDC2A0PJX2 215 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
COMMD4-215ENST00000566843 VCAM1P19320 739 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 ZNF131P52739 623 aa16.96■□□□□ 0.31
COMMD4-215ENST00000566843 SATB1Q01826 763 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms