RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PUF60Q9UHX1 559 aaKnown RBP31.16■■■□□ 2.58
UBFD1-206ENST00000566669 CARNS1A5YM72 827 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 M0R2N6 131 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 TBX10O75333 385 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 IBSPP21815 317 aaPredicted RBP31.15■■■□□ 2.58
UBFD1-206ENST00000566669 PPM1AP35813 382 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 GATMP50440 423 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 GPC3P51654 580 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 TARBP2Q15633 366 aaKnown RBP31.15■■■□□ 2.58
UBFD1-206ENST00000566669 THNSL1Q8IYQ7 743 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 LRRC71Q8N4P6 559 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 MICAL1Q8TDZ2 1067 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 NAP1L4Q99733 375 aaKnown RBP31.15■■■□□ 2.58
UBFD1-206ENST00000566669 PDRG1Q9NUG6 133 aa31.15■■■□□ 2.58
UBFD1-206ENST00000566669 TYW1Q9NV66 732 aaKnown RBP31.15■■■□□ 2.58
UBFD1-206ENST00000566669 DKC1O60832 514 aaKnown RBP eCLIP31.14■■■□□ 2.58
UBFD1-206ENST00000566669 FGF18O76093 207 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 EOMESO95936 686 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 SRGAP2BP0DMP2 458 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 DARSP14868 501 aaKnown RBP31.14■■■□□ 2.58
UBFD1-206ENST00000566669 DLX2Q07687 328 aaPredicted RBP31.14■■■□□ 2.58
UBFD1-206ENST00000566669 COASYQ13057 564 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 EXOC8Q8IYI6 725 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 LRRC43Q8N309 656 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 COLGALT1Q8NBJ5 622 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 MSLNLQ96KJ4 702 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 INO80BQ9C086 356 aaPredicted RBP31.14■■■□□ 2.58
UBFD1-206ENST00000566669 TLE6Q9H808 572 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 C11orf16Q9NQ32 467 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 CHST12Q9NRB3 414 aa31.14■■■□□ 2.58
UBFD1-206ENST00000566669 GCFC2P16383 781 aaKnown RBP31.13■■■□□ 2.57
UBFD1-206ENST00000566669 NRIP1P48552 1158 aa31.13■■■□□ 2.57
UBFD1-206ENST00000566669 PLCB3Q01970 1234 aa31.13■■■□□ 2.57
UBFD1-206ENST00000566669 B3GNT9Q6UX72 402 aa31.13■■■□□ 2.57
UBFD1-206ENST00000566669 NLRP7Q8WX94 980 aa31.13■■■□□ 2.57
UBFD1-206ENST00000566669 GCOM2Q9BZD3 368 aaPredicted RBP31.13■■■□□ 2.57
UBFD1-206ENST00000566669 NEFLP07196 543 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 IRS1P35568 1242 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 UGCGQ16739 394 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 ETNPPLQ8TBG4 499 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 FAM20AQ96MK3 541 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 SEPT9Q9UHD8 586 aaPredicted RBP31.12■■■□□ 2.57
UBFD1-206ENST00000566669 RAPGEFL1Q9UHV5 662 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 PPME1Q9Y570 386 aa31.12■■■□□ 2.57
UBFD1-206ENST00000566669 A0A0U1RQF3 1178 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 CSPG5O95196 566 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 TDP2O95551 362 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 GTF2F1P35269 517 aaKnown RBP eCLIP31.11■■■□□ 2.57
UBFD1-206ENST00000566669 KRT17Q04695 432 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 ECHDC2Q86YB7 292 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 SMRP1Q8NCR6 262 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 KIAA1671Q9BY89 1806 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 MRPL9Q9BYD2 267 aaKnown RBP31.11■■■□□ 2.57
UBFD1-206ENST00000566669 CWH43Q9H720 699 aa31.11■■■□□ 2.57
UBFD1-206ENST00000566669 DDX25Q9UHL0 483 aaKnown RBP31.11■■■□□ 2.57
UBFD1-206ENST00000566669 ATG2AQ2TAZ0 1938 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 STK36Q9NRP7 1315 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 CCDC194A0A1B0GVG4 234 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 LINC01565O15544 149 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 FGFR1P11362 822 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 SKIP12755 728 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 PSMC5P62195 406 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 CLUL1Q15846 466 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 ADGRD2Q7Z7M1 963 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 ZNF410Q86VK4 478 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 MRPS27Q92552 414 aaKnown RBP31.1■■■□□ 2.57
UBFD1-206ENST00000566669 ZNF558Q96NG5 402 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 TRAIPQ9BWF2 469 aa31.1■■■□□ 2.57
UBFD1-206ENST00000566669 NGRNQ9NPE2 291 aaKnown RBP31.1■■■□□ 2.57
UBFD1-206ENST00000566669 FNDC1Q4ZHG4 1894 aaPredicted RBP31.1■■■□□ 2.57
UBFD1-206ENST00000566669 IGKV6-21A0A0C4DH24 114 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 EIF5BO60841 1220 aaKnown RBP31.09■■■□□ 2.57
UBFD1-206ENST00000566669 SFPQP23246 707 aaKnown RBP eCLIP31.09■■■□□ 2.57
UBFD1-206ENST00000566669 STK3Q13188 491 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 ANKRD1Q15327 319 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 NPY5RQ15761 445 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 PPP4R3AQ6IN85 833 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 WASF1Q92558 559 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 CASD1Q96PB1 797 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 SLKQ9H2G2 1235 aaPredicted RBP31.09■■■□□ 2.57
UBFD1-206ENST00000566669 CLEC1BQ9P126 229 aa31.09■■■□□ 2.57
UBFD1-206ENST00000566669 TBX3O15119 743 aa31.08■■■□□ 2.57
UBFD1-206ENST00000566669 ANAPC15P60006 121 aa31.08■■■□□ 2.57
UBFD1-206ENST00000566669 MTERF2Q49AM1 385 aa31.08■■■□□ 2.57
UBFD1-206ENST00000566669 PHF20Q9BVI0 1012 aa31.08■■■□□ 2.57
UBFD1-206ENST00000566669 FAM86C2PA6NEL3 165 aa31.07■■■□□ 2.56
UBFD1-206ENST00000566669 FSCN2O14926 492 aa31.07■■■□□ 2.56
UBFD1-206ENST00000566669 MAFO75444 373 aaPredicted RBP31.07■■■□□ 2.56
UBFD1-206ENST00000566669 PPP2R5CQ13362 524 aa31.07■■■□□ 2.56
UBFD1-206ENST00000566669 BMS1Q14692 1282 aaKnown RBP31.07■■■□□ 2.56
UBFD1-206ENST00000566669 DUSP6Q16828 381 aa31.07■■■□□ 2.56
UBFD1-206ENST00000566669 KCNT2Q6UVM3 1135 aa31.07■■■□□ 2.56
UBFD1-206ENST00000566669 NEK8Q86SG6 692 aa31.07■■■□□ 2.56
UBFD1-206ENST00000566669 RBM23Q86U06 439 aaKnown RBP31.07■■■□□ 2.56
UBFD1-206ENST00000566669 INF2Q27J81 1249 aa31.06■■■□□ 2.56
UBFD1-206ENST00000566669 HERC4Q5GLZ8 1057 aaPredicted RBP31.06■■■□□ 2.56
UBFD1-206ENST00000566669 SPG21Q9NZD8 308 aa31.06■■■□□ 2.56
UBFD1-206ENST00000566669 WDR81Q562E7 1941 aa31.05■■■□□ 2.56
UBFD1-206ENST00000566669 DDX11L8A8MPP1 907 aa31.05■■■□□ 2.56
UBFD1-206ENST00000566669 QARSP47897 775 aaKnown RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms