RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 EDRF1Q3B7T1 1238 aa11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 MMP19Q99542 508 aa11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 RHOXF2Q9BQY4 288 aa11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 TUFT1Q9NNX1 390 aa11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 TBC1D22BQ9NU19 505 aa11.86□□□□□ -0.51
PDXDC1-214ENST00000566633 MACROD2A1Z1Q3 448 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 MAP2K7O14733 419 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 P4HBP07237 508 aaKnown RBP11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 KCTD2Q14681 263 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 CACNA2D4Q7Z3S7 1137 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 FAM133AQ8N9E0 248 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 MMS19Q96T76 1030 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 PFASO15067 1338 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 AKR1B10O60218 316 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 SLC25A27O95847 323 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 TUBBP07437 444 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 NPEPPSP55786 919 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 LY6KQ17RY6 165 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 HGSNATQ68CP4 663 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 PLA2G4FQ68DD2 849 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 GPRC5AQ8NFJ5 357 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 SYN2Q92777 582 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 GPRASP2Q96D09 838 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 FGD4Q96M96 766 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 NACC1Q96RE7 527 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 IKZF4Q9H2S9 585 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 DEF6Q9H4E7 631 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 CEP72Q9P209 647 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 PNMA3Q9UL41 463 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 FAM184BQ9ULE4 1060 aa11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDXDC1-214ENST00000566633 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 EIF3JO75822 258 aaKnown RBP11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 VSNL1P62760 191 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 SWSAP1Q6NVH7 229 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 SFR1Q86XK3 245 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 KSR1Q8IVT5 923 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 NUCKS1Q9H1E3 243 aaKnown RBP11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 TRAF3IP3Q9Y228 551 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 SSU72P8A0A1W2PR75 194 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 CETN3O15182 167 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 HOXD13P35453 343 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 QARSP47897 775 aaKnown RBP11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 KCNA1Q09470 495 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 GNPTABQ3T906 1256 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 SAPCD2Q86UD0 394 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 TRIM58Q8NG06 486 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 JPH1Q9HDC5 661 aaPredicted RBP11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 ABCB6Q9NP58 842 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 L1RE1Q9UN81 338 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 JRKLQ9Y4A0 524 aa11.84□□□□□ -0.51
PDXDC1-214ENST00000566633 WDR64B1ANS9 1081 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 IGF2BP3O00425 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 PJA2O43164 708 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 TLR2O60603 784 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 ERLIN1O75477 346 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 MYBP10242 640 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 YWHABP31946 246 aaKnown RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 MAGEA1P43355 309 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 FAM193AP78312 1265 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 SMC1AQ14683 1233 aaKnown RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 KNOP1Q1ED39 458 aaKnown RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 WDR93Q6P2C0 686 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 XRRA1Q6P2D8 792 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 FBXO16Q8IX29 292 aaPredicted RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 NLRC4Q9NPP4 1024 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 ARHGEF35A5YM69 484 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 MAFGO15525 162 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 ZNF862O60290 1169 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 TACC1O75410 805 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 ARIH2O95376 493 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 NR2F2P24468 414 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 SOX10P56693 466 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 ACTR2P61160 394 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 POLR2FP61218 127 aaKnown RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 SFMBT2Q5VUG0 894 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 MYCT1Q8N699 235 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 CAPZA3Q96KX2 299 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
PDXDC1-214ENST00000566633 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms