RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ZNF507Q8TCN5 953 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 FAM213AQ9BRX8 229 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 GAKO14976 1311 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 WDR64B1ANS9 1081 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 FMO5P49326 533 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 NPEPPSP55786 919 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.4
CDH1-210ENST00000566612 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.4
CDH1-210ENST00000566612 WHAMMQ8TF30 809 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 MTMR8Q96EF0 704 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 ZNF668Q96K58 619 aaPredicted RBP12.52□□□□□ -0.4
CDH1-210ENST00000566612 FMO2Q99518 471 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 TRPC6Q9Y210 931 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 TARSL2A2RTX5 802 aaKnown RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 NR1D1P20393 614 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 GLE1Q53GS7 698 aaKnown RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 PLA2G4FQ68DD2 849 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 ZBTB33Q86T24 672 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 FAM151AQ8WW52 585 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 TUFT1Q9NNX1 390 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 NKIRAS1Q9NYS0 192 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 DAPK3O43293 454 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 KRT14P02533 472 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 CD58P19256 250 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 MARK3P27448 753 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 PBX1P40424 430 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 PPP2R5EQ16537 467 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 ZNF394Q53GI3 561 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 FIGNQ5HY92 759 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.41
CDH1-210ENST00000566612 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 CSADQ9Y600 493 aa12.52□□□□□ -0.41
CDH1-210ENST00000566612 CCND2P30279 289 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 KCNA1Q09470 495 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 MTMR2Q13614 643 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 PAPD7Q5XG87 772 aaKnown RBP12.51□□□□□ -0.41
CDH1-210ENST00000566612 PASD1Q8IV76 773 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
CDH1-210ENST00000566612 K7ERI5 159 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 IFT88Q13099 833 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 NAB2Q15742 525 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 ECM1Q16610 540 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
CDH1-210ENST00000566612 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 PIM2Q9P1W9 311 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 HPCAL4Q9UM19 191 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 RGL2O15211 777 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 SRGAP2CP0DJJ0 459 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
CDH1-210ENST00000566612 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 KCNH7Q9NS40 1196 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 ZNF148Q9UQR1 794 aa12.51□□□□□ -0.41
CDH1-210ENST00000566612 CYP26A1O43174 497 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 THAP12O43422 761 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 PON1P27169 355 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 YWHABP31946 246 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 SREBF1P36956 1147 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 MIIPQ5JXC2 388 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 SLC35G2Q8TBE7 412 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDH1-210ENST00000566612 HEMGNQ9BXL5 484 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 PARP4Q9UKK3 1724 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 CCDC188H7C350 402 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 CASP5P51878 434 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 HMGCS2P54868 508 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 GPC5P78333 572 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 COG2Q14746 738 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 CLUL1Q15846 466 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 CERKQ8TCT0 537 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 MAK16Q9BXY0 300 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 INO80BQ9C086 356 aaPredicted RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 NAGPAQ9UK23 515 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 EML1O00423 815 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 PSAPP07602 524 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 COPB2P35606 906 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 TMEM119Q4V9L6 283 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms