RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 GYPCP04921 128 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 SSBP05455 408 aaKnown RBP eCLIP18.52■□□□□ 0.56
RAB40C-210ENST00000566290 KCTD2Q14681 263 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 HSP90AA4PQ58FG1 418 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 PRAMEF19Q5SWL8 479 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 LHX8Q68G74 356 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 NSMFQ6X4W1 530 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 STXBP4Q6ZWJ1 553 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 SCFD1Q8WVM8 642 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 BAG1Q99933 345 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-210ENST00000566290 EDEM3Q9BZQ6 932 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 TTYH1Q9H313 450 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-210ENST00000566290 RGL1Q9NZL6 768 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 TCEAL9Q9UHQ7 104 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 TNFRSF10AO00220 468 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 EIF2AK2P19525 551 aaKnown RBP18.51■□□□□ 0.55
RAB40C-210ENST00000566290 QARSP47897 775 aaKnown RBP18.51■□□□□ 0.55
RAB40C-210ENST00000566290 CYP4A11Q02928 519 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 MFSD14CQ5VZR4 134 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 E4F1Q66K89 784 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-210ENST00000566290 OLFML2BQ68BL8 750 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 RUSC1Q9BVN2 902 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 TTYH3Q9C0H2 523 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 ANKEF1Q9NU02 776 aa18.51■□□□□ 0.55
RAB40C-210ENST00000566290 DNAJC25-GNG10A0A024R161 153 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 ZSCAN12O43309 604 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 CYBAP13498 195 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 EDNRBP24530 442 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 PLA2G5P39877 138 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 UBXN1Q04323 297 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 MYBPC2Q14324 1141 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 KNOP1Q1ED39 458 aaKnown RBP18.5■□□□□ 0.55
RAB40C-210ENST00000566290 FGD4Q96M96 766 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 LBHD1Q9BQE6 289 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-210ENST00000566290 VPS16Q9H269 839 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 ST6GALNAC4Q9H4F1 302 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 PARVGQ9HBI0 331 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 TYW1Q9NV66 732 aaKnown RBP18.5■□□□□ 0.55
RAB40C-210ENST00000566290 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
RAB40C-210ENST00000566290 SLC16A3O15427 465 aaKnown RBP18.49■□□□□ 0.55
RAB40C-210ENST00000566290 PSMC5P62195 406 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 CTTNQ14247 550 aaKnown RBP18.49■□□□□ 0.55
RAB40C-210ENST00000566290 SHHQ15465 462 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 FKBP15Q5T1M5 1219 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 SFR1Q86XK3 245 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 TMTC1Q8IUR5 882 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 TPH2Q8IWU9 490 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 KCNN1Q92952 543 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 HPS3Q969F9 1004 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 DNAJC7Q99615 494 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 STRA6Q9BX79 667 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 CAPN11Q9UMQ6 739 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 PLXNA1Q9UIW2 1896 aa18.49■□□□□ 0.55
RAB40C-210ENST00000566290 ARHGEF35A5YM69 484 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 B4DLN1 442 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 SPATA31C2B4DYI2 1134 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 FOSL2P15408 326 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 KCNA2P16389 499 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 SCP2P22307 547 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 MTIF2P46199 727 aaKnown RBP18.48■□□□□ 0.55
RAB40C-210ENST00000566290 CDK17Q00537 523 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 RBL2Q08999 1139 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 VWA3BQ502W6 1294 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 ANKRD35Q8N283 1001 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 GOLGA5Q8TBA6 731 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 FIZ1Q96SL8 496 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 NOC4LQ9BVI4 516 aaKnown RBP18.48■□□□□ 0.55
RAB40C-210ENST00000566290 CGNQ9P2M7 1197 aaKnown RBP18.48■□□□□ 0.55
RAB40C-210ENST00000566290 WRAP73Q9P2S5 460 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-210ENST00000566290 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
RAB40C-210ENST00000566290 ARID2Q68CP9 1835 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 CHMP2AO43633 222 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 CALUO43852 315 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 EIF3JO75822 258 aaKnown RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 PPP1R37O75864 691 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 FAM13AO94988 1023 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 RPL13P26373 211 aaKnown RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 CNGA1P29973 690 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 SNRPFP62306 86 aaKnown RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 CNTN2Q02246 1040 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 MEA1Q16626 185 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 TJAP1Q5JTD0 557 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 C9orf50Q5SZB4 431 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 TRIM59Q8IWR1 403 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 HVCN1Q96D96 273 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 FAM122AQ96E09 287 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 PURBQ96QR8 312 aaKnown RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 TINF2Q9BSI4 451 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 MKNK1Q9BUB5 465 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 NDST4Q9H3R1 872 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 ABHD10Q9NUJ1 306 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 SLC5A4Q9NY91 659 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 DIS3Q9Y2L1 958 aaKnown RBP18.47■□□□□ 0.55
RAB40C-210ENST00000566290 PAXBP1Q9Y5B6 917 aa18.47■□□□□ 0.55
RAB40C-210ENST00000566290 NPHP3-ACAD11A0A0J9YXS1 232 aa18.46■□□□□ 0.55
RAB40C-210ENST00000566290 CETN3O15182 167 aa18.46■□□□□ 0.55
RAB40C-210ENST00000566290 RGS20O76081 388 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms