RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SEC24BO95487 1268 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 FGFR1P11362 822 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 EIF4BP23588 611 aaKnown RBP20.83■□□□□ 0.93
CLN6-204ENST00000564752 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 DAGLBQ8NCG7 672 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 RDM1Q8NG50 284 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 MSLNLQ96KJ4 702 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 CWH43Q9H720 699 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 CLEC1BQ9P126 229 aa20.83■□□□□ 0.93
CLN6-204ENST00000564752 EVPLQ92817 2033 aa20.83■□□□□ 0.92
CLN6-204ENST00000564752 PRR33A8MZF0 331 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 DCXO43602 365 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 EYA4O95677 639 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 XBP1P17861 261 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 NRIP1P48552 1158 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 NDUFV1P49821 464 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 TARBP2Q15633 366 aaKnown RBP20.82■□□□□ 0.92
CLN6-204ENST00000564752 NPY5RQ15761 445 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 B3GNT9Q6UX72 402 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 HCSTQ9UBK5 93 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 PCDHGC5Q9Y5F6 944 aa20.82■□□□□ 0.92
CLN6-204ENST00000564752 MYH9P35579 1960 aaKnown RBP20.82■□□□□ 0.92
CLN6-204ENST00000564752 ATG2AQ2TAZ0 1938 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 FGF18O76093 207 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 TDP2O95551 362 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 ZSCAN20P17040 1043 aaPredicted RBP20.81■□□□□ 0.92
CLN6-204ENST00000564752 GPC3P51654 580 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 NEK4P51957 841 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 TBC1D8BQ0IIM8 1120 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 CSPP1Q1MSJ5 1256 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 MIER3Q7Z3K6 550 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 RBM23Q86U06 439 aaKnown RBP20.81■□□□□ 0.92
CLN6-204ENST00000564752 MICAL1Q8TDZ2 1067 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 MBOAT7Q96N66 472 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 CASD1Q96PB1 797 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 NIFKQ9BYG3 293 aaKnown RBP20.81■□□□□ 0.92
CLN6-204ENST00000564752 TMEM117Q9H0C3 514 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 RNF19AQ9NV58 838 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 KCNJ14Q9UNX9 436 aa20.81■□□□□ 0.92
CLN6-204ENST00000564752 HOXA2O43364 376 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 STBD1O95210 358 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 DARSP14868 501 aaKnown RBP20.8■□□□□ 0.92
CLN6-204ENST00000564752 COASYQ13057 564 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 XKR3Q5GH77 459 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 MOXD1Q6UVY6 613 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 LRRC55Q6ZSA7 311 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 THNSL1Q8IYQ7 743 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 ETNPPLQ8TBG4 499 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 ZNF668Q96K58 619 aaPredicted RBP20.8■□□□□ 0.92
CLN6-204ENST00000564752 CEP89Q96ST8 783 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 POP1Q99575 1024 aaKnown RBP20.8■□□□□ 0.92
CLN6-204ENST00000564752 TLE6Q9H808 572 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 TLR9Q9NR96 1032 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 WDR81Q562E7 1941 aa20.8■□□□□ 0.92
CLN6-204ENST00000564752 LARGE1O95461 756 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 GLP2RO95838 553 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 LAG3P18627 525 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 ERVFC1P60507 584 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 NONOQ15233 471 aaKnown RBP eCLIP20.79■□□□□ 0.926e-7■■■□□ 17.3
CLN6-204ENST00000564752 ME3Q16798 604 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 PDE12Q6L8Q7 609 aaKnown RBP20.79■□□□□ 0.92
CLN6-204ENST00000564752 KRT25Q7Z3Z0 450 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 ECHDC2Q86YB7 292 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 NECAB1Q8N987 351 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 SMRP1Q8NCR6 262 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 WASF1Q92558 559 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 GTF3C6Q969F1 213 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 PHF20Q9BVI0 1012 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 ORC3Q9UBD5 711 aaPredicted RBP20.79■□□□□ 0.92
CLN6-204ENST00000564752 LZTS1Q9Y250 596 aa20.79■□□□□ 0.92
CLN6-204ENST00000564752 IGKV6-21A0A0C4DH24 114 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 FSCN2O14926 492 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 DTNBO60941 627 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 CTDNEP1O95476 244 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 CDC42EP1Q00587 391 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 PLCB3Q01970 1234 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 DRP2Q13474 957 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 NLRP7Q8WX94 980 aa20.78■□□□□ 0.92
CLN6-204ENST00000564752 BARX2Q9UMQ3 279 aaPredicted RBP20.78■□□□□ 0.92
CLN6-204ENST00000564752 KIAA1671Q9BY89 1806 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 A0A0U1RQF3 1178 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 PER2O15055 1255 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 FGFR4P22455 802 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 INF2Q27J81 1249 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 MTERF2Q49AM1 385 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 ZNF598Q86UK7 904 aaKnown RBP20.77■□□□□ 0.92
CLN6-204ENST00000564752 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
CLN6-204ENST00000564752 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
CLN6-204ENST00000564752 CDCA3Q99618 268 aaPredicted RBP20.77■□□□□ 0.92
CLN6-204ENST00000564752 SEPT9Q9UHD8 586 aaPredicted RBP20.77■□□□□ 0.92
CLN6-204ENST00000564752 DDX25Q9UHL0 483 aaKnown RBP20.77■□□□□ 0.92
CLN6-204ENST00000564752 FNDC1Q4ZHG4 1894 aaPredicted RBP20.76■□□□□ 0.91
CLN6-204ENST00000564752 TMEM150BA6NC51 233 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 EOMESO95936 686 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 DNM2P50570 870 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 DUSP6Q16828 381 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 C8orf34Q49A92 452 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 KCNT2Q6UVM3 1135 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms