RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 BCCIPQ9P287 314 aaKnown RBP eCLIP16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 DNAJC12Q9UKB3 198 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 STK24Q9Y6E0 443 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 IGSF9BQ9UPX0 1349 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 FGGP02679 453 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 BMP3P12645 472 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 FMO5P49326 533 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 NLRP14Q86W24 1093 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 GMCL1P1Q8NEA9 526 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 GMCL1Q96IK5 515 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 WDR18Q9BV38 432 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 AMFRQ9UKV5 643 aa16.83■□□□□ 0.28
GTF3C1-205ENST00000564747 MYO1FO00160 1098 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 GAP43P17677 238 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 CYP2J2P51589 502 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 NPEPPSP55786 919 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 DPH5Q9H2P9 285 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 PPANQ9NQ55 473 aaKnown RBP16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 CYP3A4P08684 503 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 UBXN2AP68543 259 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 FBXW10Q5XX13 1052 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 ADAT2Q7Z6V5 191 aaKnown RBP16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 MYCBPAPQ8TBZ2 947 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 STK33Q9BYT3 514 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 TRIM31Q9BZY9 425 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 GPR88Q9GZN0 384 aa16.82■□□□□ 0.28
GTF3C1-205ENST00000564747 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 E7EVH7 732 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 EIF3DO15371 548 aaKnown RBP eCLIP16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 GH2P01242 217 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 HDLBPQ00341 1268 aaKnown RBP16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 DCAF12L1Q5VU92 463 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 CCDC26Q8TAB7 109 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 FIZ1Q96SL8 496 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 SLITRK6Q9H5Y7 841 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 PARVGQ9HBI0 331 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 TAS2R14Q9NYV8 317 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 MEFVO15553 781 aaPredicted RBP16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 PPP1R12BO60237 982 aaPredicted RBP16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 CFBP00751 764 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 COPB2P35606 906 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 PRPF4BQ13523 1007 aaKnown RBP16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 ARHGEF26Q96DR7 871 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 TRIM51Q9BSJ1 452 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 LRRC4CQ9HCJ2 640 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 ATP8B3O60423 1300 aa16.81■□□□□ 0.28
GTF3C1-205ENST00000564747 LMNB1P20700 586 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 ARHGAP44Q17R89 818 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 LRCH2Q5VUJ6 765 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 ZNF720Q7Z2F6 126 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 TMC3Q7Z5M5 1100 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 PALB2Q86YC2 1186 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 RDH13Q8NBN7 331 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 RFFLQ8WZ73 363 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 DDX3YO15523 660 aaKnown RBP16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 PSMD10O75832 226 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 NPR1P16066 1061 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 TMOD1P28289 359 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 PPATQ06203 517 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 DHX9Q08211 1270 aaKnown RBP16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 CTNNBL1Q8WYA6 563 aaPredicted RBP16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 SYT11Q9BT88 431 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 SEPT11Q9NVA2 429 aaKnown RBP16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 BCS1LQ9Y276 419 aa16.8■□□□□ 0.28
GTF3C1-205ENST00000564747 DCDC2CA8MYV0 355 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 KIAA0754O94854 1291 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 TMEM253P0C7T8 217 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 ODF2Q5BJF6 829 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 SEC14L1Q92503 715 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 INTS2Q9H0H0 1204 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 THAP2Q9H0W7 228 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 SLC12A6Q9UHW9 1150 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 UTP11Q9Y3A2 253 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 FAM107AO95990 144 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 BTNL9Q6UXG8 535 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 FAM178BQ8IXR5 827 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 GEMIN8Q9NWZ8 242 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 CNOT8Q9UFF9 292 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 FRMD4BQ9Y2L6 1034 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 CAPN7Q9Y6W3 813 aa16.79■□□□□ 0.28
GTF3C1-205ENST00000564747 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-205ENST00000564747 PLS1Q14651 629 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms