RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF236Q9UL36 1845 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 LGR5O75473 907 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 TXNP10599 105 aaKnown RBP17.1■□□□□ 0.33
COMMD4-210ENST00000564587 NCKAP1LP55160 1127 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 GTF2BQ00403 316 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 RBL2Q08999 1139 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 LAMC2Q13753 1193 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 TAF1CQ15572 869 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-210ENST00000564587 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
COMMD4-210ENST00000564587 MIIPQ5JXC2 388 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 EEPD1Q7L9B9 569 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 SLC9A9Q8IVB4 645 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 TRIM59Q8IWR1 403 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 KCNN1Q92952 543 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 IFT74Q96LB3 600 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 BAG1Q99933 345 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-210ENST00000564587 BCAS3Q9H6U6 928 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 ARMCX3Q9UH62 379 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-210ENST00000564587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
COMMD4-210ENST00000564587 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
COMMD4-210ENST00000564587 GAS2O43903 313 aaKnown RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 MFAP3LO75121 409 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 PSMC2P35998 433 aaKnown RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 LY6KQ17RY6 165 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 HAUS6Q7Z4H7 955 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 IFNL1Q8IU54 200 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 FBXO16Q8IX29 292 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 BBXQ8WY36 941 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 GPR20Q99678 358 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 LUC7L2Q9Y383 392 aaKnown RBP17.09■□□□□ 0.33
COMMD4-210ENST00000564587 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
COMMD4-210ENST00000564587 A0A1W2PQJ5 194 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 GH1P01241 217 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 GYPCP04921 128 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 POLGP54098 1239 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 PEX3P56589 373 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 ZC2HC1CQ53FD0 456 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 MAEAQ7L5Y9 396 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 ZNF397Q8NF99 534 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 EMID1Q96A84 441 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 SPATA33Q96N06 139 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 KMT5AQ9NQR1 393 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-210ENST00000564587 CAPN11Q9UMQ6 739 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 FRMD4BQ9Y2L6 1034 aa17.08■□□□□ 0.32
COMMD4-210ENST00000564587 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
COMMD4-210ENST00000564587 TLR2O60603 784 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 ARIH2O95376 493 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 TRIM21P19474 475 aaKnown RBP17.07■□□□□ 0.32
COMMD4-210ENST00000564587 CASP14P31944 242 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 ADKP55263 362 aaKnown RBP17.07■□□□□ 0.32
COMMD4-210ENST00000564587 EMC2Q15006 297 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 SYCP1Q15431 976 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 MTERF2Q49AM1 385 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-210ENST00000564587 TMTC1Q8IUR5 882 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 GLG1Q92896 1179 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 EEF2KMTQ96G04 330 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 PCYT2Q99447 389 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 ABHD16BQ9H3Z7 469 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 AGPAT3Q9NRZ7 376 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 DMAC2Q9NW81 257 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 MCM3APO60318 1980 aa17.07■□□□□ 0.32
COMMD4-210ENST00000564587 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 PHLPP2Q6ZVD8 1323 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 TMEM150BA6NC51 233 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 CCDC169A6NNP5 214 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 MAPK13O15264 365 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 SORBS3O60504 671 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 TUBB4AP04350 444 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 XRCC5P13010 732 aaKnown RBP17.06■□□□□ 0.32
COMMD4-210ENST00000564587 ATP4AP20648 1035 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 FECHP22830 423 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 NPTX2P47972 431 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 TARBP2Q15633 366 aaKnown RBP17.06■□□□□ 0.32
COMMD4-210ENST00000564587 IQSEC1Q6DN90 963 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 C17orf99Q6UX52 265 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 OR8K1Q8NGG5 319 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 ATP8B4Q8TF62 1192 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 TCP11Q8WWU5 503 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 TINF2Q9BSI4 451 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 XPNPEP1Q9NQW7 623 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms