RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NRCAMQ92823 1304 aa14.3□□□□□ -0.12
SPG7-209ENST00000564047 IGKV6-21A0A0C4DH24 114 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 BIN1O00499 593 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 HIP1RO75146 1068 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 FAM13AO94988 1023 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
SPG7-209ENST00000564047 SMIM10L2AP0DMW4 78 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 SMIM10L2BP0DMW5 78 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 ZNF131P52739 623 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 ACLYP53396 1101 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 RTP1P59025 263 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 NLRP12P59046 1061 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
SPG7-209ENST00000564047 TYRO3Q06418 890 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 COASYQ13057 564 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 MAPK7Q13164 816 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 PSMD2Q13200 908 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 GRIK4Q16099 956 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 LRIT3Q3SXY7 679 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 ZNF658Q5TYW1 1059 aaPredicted RBP14.29□□□□□ -0.12
SPG7-209ENST00000564047 LRSAM1Q6UWE0 723 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 NECAB2Q7Z6G3 386 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
SPG7-209ENST00000564047 DAW1Q8N136 415 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 KIFAP3Q92845 792 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 DEFB118Q96PH6 123 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 C17orf75Q9HAS0 396 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 MTMR10Q9NXD2 777 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 OGDHLQ9ULD0 1010 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 LOXHD1Q8IVV2 1947 aa14.29□□□□□ -0.12
SPG7-209ENST00000564047 DNAH12Q6ZR08 3092 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 RSPH10B2B2RC85 870 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 DNM1LO00429 736 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 C22orf31O95567 290 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 RSPH10BP0C881 870 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 KLRC1P26715 233 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 STX1AQ16623 288 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 HERC4Q5GLZ8 1057 aaPredicted RBP14.28□□□□□ -0.12
SPG7-209ENST00000564047 FAM102BQ5T8I3 360 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 MAEAQ7L5Y9 396 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 C7orf31Q8N865 590 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 TRAPPC12Q8WVT3 735 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 TCP11Q8WWU5 503 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 PAWRQ96IZ0 340 aaKnown RBP14.28□□□□□ -0.12
SPG7-209ENST00000564047 ZHX3Q9H4I2 956 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 OLFML3Q9NRN5 406 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 LARSQ9P2J5 1176 aaKnown RBP14.28□□□□□ -0.12
SPG7-209ENST00000564047 KCNG1Q9UIX4 513 aa14.28□□□□□ -0.12
SPG7-209ENST00000564047 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 KBTBD13C9JR72 458 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
SPG7-209ENST00000564047 GNAT1P11488 350 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 PLS3P13797 630 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 BMP6P22004 513 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 HOXC8P31273 242 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 ARL2P36404 184 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 CHMP4BP1P59074 171 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 IGBP1P78318 339 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 ADAM17P78536 824 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 NBPF20Q3BBV1 942 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 MARCH8Q5T0T0 291 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 IER5Q5VY09 327 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 ISM2Q6H9L7 571 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 MTHFD1LQ6UB35 978 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 SESTD1Q86VW0 696 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 SFR1Q86XK3 245 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 TDHQ8IZJ6 230 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 MYCT1Q8N699 235 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 MLKLQ8NB16 471 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 LMBR1Q8WVP7 490 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 SETD4Q9NVD3 440 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 PHF24Q9UPV7 400 aa14.27□□□□□ -0.13
SPG7-209ENST00000564047 WDR81Q562E7 1941 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 C17orf102A2RUQ5 167 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 MBLAC1A4D2B0 266 aaPredicted RBP14.26□□□□□ -0.13
SPG7-209ENST00000564047 PPP1R2P41236 205 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 DNM2P50570 870 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 PTPN11Q06124 597 aaPredicted RBP14.26□□□□□ -0.13
SPG7-209ENST00000564047 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 STK4Q13043 487 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 COBLL1Q53SF7 1204 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 ODR4Q5SWX8 454 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 EFCAB12Q6NXP0 572 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 NFRKBQ6P4R8 1299 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 LINC01465Q8N7H1 131 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 TMEM143Q96AN5 459 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 NTPCRQ9BSD7 190 aaKnown RBP14.26□□□□□ -0.13
SPG7-209ENST00000564047 POLR3FQ9H1D9 316 aaPredicted RBP14.26□□□□□ -0.13
SPG7-209ENST00000564047 POLD4Q9HCU8 107 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
SPG7-209ENST00000564047 GTF2IRD1Q9UHL9 959 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms