RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ZNF496Q96IT1 587 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-208ENST00000563911 CATSPERZQ9NTU4 200 aa7.64□□□□□ -1.19
HERPUD1-208ENST00000563911 MBNL3Q9NUK0 354 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-208ENST00000563911 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.64□□□□□ -1.195e-9■■■□□ 15.6
HERPUD1-208ENST00000563911 ADAMTS6Q9UKP5 1117 aa7.64□□□□□ -1.19
HERPUD1-208ENST00000563911 MRC1P22897 1456 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 SNED1Q8TER0 1413 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 CCDC66A2RUB6 948 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 PRAMEF22A3QJZ6 481 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 M0R2C6 588 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 FZD9O00144 591 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 TRAF5O00463 557 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 GLRX3O76003 335 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 NPTXRO95502 500 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 CKMP06732 381 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 PYGMP11217 842 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 TACR1P25103 407 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 EPHX2P34913 555 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 GDNFP39905 211 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 CORO7P57737 925 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 MVKQ03426 396 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 KIR3DS1Q14943 382 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 C1orf141Q5JVX7 400 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 ZMYM1Q5SVZ6 1142 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 DLK2Q6UY11 383 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 IL17REQ8NFR9 667 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 PLCD4Q9BRC7 762 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 FAM126AQ9BYI3 521 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 CDIP1Q9H305 208 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 PANK3Q9H999 370 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 ATP8A1Q9Y2Q0 1164 aa7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 COA3Q9Y2R0 106 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-208ENST00000563911 KLRG2A4D1S0 409 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 RNASE1P07998 156 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 HMOX1P09601 288 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 RAC2P15153 192 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 TRHRP34981 398 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 PDE6BP35913 854 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 EPS15P42566 896 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 STRN3Q13033 797 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 C16orf59Q7L2K0 433 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 STRA8Q7Z7C7 330 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 ATL2Q8NHH9 583 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 PLEKHO2Q8TD55 490 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 CAPNS2Q96L46 248 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 MTA3Q9BTC8 594 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 CELF4Q9BZC1 486 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 MCOLN1Q9GZU1 580 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 CABP5Q9NP86 173 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 PDLIM7Q9NR12 457 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 DDX21Q9NR30 783 aaKnown RBP eCLIP7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 C19orf73Q9NVV2 129 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 ADGRE2Q9UHX3 823 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 GPR160Q9UJ42 338 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 HACL1Q9UJ83 578 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 ACSL6Q9UKU0 697 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 SCN4AP35499 1836 aa7.62□□□□□ -1.19
HERPUD1-208ENST00000563911 UBR2Q8IWV8 1755 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 THSD7BQ9C0I4 1608 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 NOTOA8MTQ0 251 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 WNT9AO14904 365 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 PSPNO60542 156 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 DGKIO75912 1065 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 HPXP02790 462 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 MSL3P1P0C860 447 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 GNAT1P11488 350 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 CPEP16870 476 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 SCNN1BP51168 640 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 CYP4F8P98187 520 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 SART3Q15020 963 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 NR0B2Q15466 257 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 SEPT7Q16181 437 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 CRY1Q16526 586 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 ZNF792Q3KQV3 632 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 TMEM177Q53S58 311 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 WWC2Q6AWC2 1192 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 DDX42Q86XP3 938 aaKnown RBP eCLIP7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 PANK1Q8TE04 598 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 MYLIPQ8WY64 445 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 MASTLQ96GX5 879 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 GPR101Q96P66 508 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 MCM8Q9UJA3 840 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 USP16Q9Y5T5 823 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 X6R8D5 127 aa7.61□□□□□ -1.19
HERPUD1-208ENST00000563911 HYAL3O43820 417 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 COL6A2P12110 1019 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 POU3F3P20264 500 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 MAP2K1Q02750 393 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 SPIRE1Q08AE8 756 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 GRM1Q13255 1194 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 TIGD5Q53EQ6 642 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 MROH9Q5TGP6 573 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 BICRALQ6AI39 1079 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 OVCH1Q7RTY7 1134 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 SIRT2Q8IXJ6 389 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 LILRA2Q8N149 483 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 Q8N1Y9 231 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 SYNE4Q8N205 404 aa7.6□□□□□ -1.19
HERPUD1-208ENST00000563911 AFAP1L2Q8N4X5 818 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms