RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RTKNQ9BST9 563 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 DSCC1Q9BVC3 393 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 SFXN1Q9H9B4 322 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 DENND4AQ7Z401 1863 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 FANCMQ8IYD8 2048 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 POTEMA6NI47 508 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 NT5C1B-RDH14C9J2C7 533 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 ALDH7A1P49419 539 aaKnown RBP18.15■□□□□ 0.5
RNF40-205ENST00000563909 METAP2P50579 478 aaKnown RBP eCLIP18.15■□□□□ 0.5
RNF40-205ENST00000563909 DSC3Q14574 896 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 IMMTQ16891 758 aaKnown RBP18.15■□□□□ 0.5
RNF40-205ENST00000563909 PHLDB3Q6NSJ2 640 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 POTEGQ6S5H5 508 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 KIAA0319LQ8IZA0 1049 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 MAML2Q8IZL2 1156 aaPredicted RBP18.15■□□□□ 0.5
RNF40-205ENST00000563909 SLC44A3Q8N4M1 653 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 RNF169Q8NCN4 708 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 CUL5Q93034 780 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 PPP1R16BQ96T49 567 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 KRT23Q9C075 422 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 IL25Q9H293 177 aa18.15■□□□□ 0.5
RNF40-205ENST00000563909 CYTH3O43739 400 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 BCAR1P56945 870 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 MTMR1Q13613 665 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 KIZQ2M2Z5 673 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 PLPPR4Q7Z2D5 763 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 GPR152Q8TDT2 470 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 TMEM169Q96HH4 297 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 ZBP1Q9H171 429 aa18.14■□□□□ 0.49
RNF40-205ENST00000563909 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
RNF40-205ENST00000563909 N4BP1O75113 896 aaKnown RBP18.13■□□□□ 0.49
RNF40-205ENST00000563909 SRFP11831 508 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 GLULP15104 373 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 GBP2P32456 591 aaPredicted RBP18.13■□□□□ 0.49
RNF40-205ENST00000563909 STAT5BP51692 787 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 GIT2Q14161 759 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 CLLU1OSQ5K130 101 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 SECISBP2LQ93073 1101 aaKnown RBP18.13■□□□□ 0.49
RNF40-205ENST00000563909 OSMRQ99650 979 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 ARHGEF3Q9NR81 526 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 IRAK3Q9Y616 596 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
RNF40-205ENST00000563909 MEIS2O14770 477 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 SPTLC1O15269 473 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 CRYBB1P53674 252 aaPredicted RBP18.12■□□□□ 0.49
RNF40-205ENST00000563909 GRM4Q14833 912 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 PPFIBP1Q86W92 1011 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 FOXQ1Q9C009 403 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 SLC9A2Q9UBY0 812 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 USP18Q9UMW8 372 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 CACNA1IQ9P0X4 2223 aa18.12■□□□□ 0.49
RNF40-205ENST00000563909 BAZ2BQ9UIF8 2168 aaKnown RBP18.11■□□□□ 0.49
RNF40-205ENST00000563909 PIK3CDO00329 1044 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 LRRN2O75325 713 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 CTSAP10619 480 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 POLGP54098 1239 aaPredicted RBP18.11■□□□□ 0.49
RNF40-205ENST00000563909 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
RNF40-205ENST00000563909 SEC23AQ15436 765 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 ZNF528Q3MIS6 628 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 DCLRE1AQ6PJP8 1040 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 C15orf39Q6ZRI6 1047 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 ECHDC2Q86YB7 292 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 PJA1Q8NG27 643 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 HELQQ8TDG4 1101 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 ATRIPQ8WXE1 791 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 BORCS6Q96GS4 357 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 UBIAD1Q9Y5Z9 338 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 FAM208BQ5VWN6 2430 aa18.11■□□□□ 0.49
RNF40-205ENST00000563909 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
RNF40-205ENST00000563909 ACTR2P61160 394 aa18.1■□□□□ 0.49
RNF40-205ENST00000563909 PTH1RQ03431 593 aa18.1■□□□□ 0.49
RNF40-205ENST00000563909 PTPN14Q15678 1187 aa18.1■□□□□ 0.49
RNF40-205ENST00000563909 PPM1JQ5JR12 505 aa18.1■□□□□ 0.49
RNF40-205ENST00000563909 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
RNF40-205ENST00000563909 TMEM173Q86WV6 379 aaPredicted RBP18.1■□□□□ 0.49
RNF40-205ENST00000563909 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
RNF40-205ENST00000563909 ANO2Q9NQ90 1003 aa18.1■□□□□ 0.49
RNF40-205ENST00000563909 SPATA6Q9NWH7 488 aaPredicted RBP18.1■□□□□ 0.49
RNF40-205ENST00000563909 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
RNF40-205ENST00000563909 MAFGO15525 162 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
RNF40-205ENST00000563909 KLRC2P26717 231 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 NXPE3Q969Y0 559 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 LSG1Q9H089 658 aaKnown RBP18.09■□□□□ 0.49
RNF40-205ENST00000563909 JADE2Q9NQC1 790 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 EPS15L1Q9UBC2 864 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 FBXO4Q9UKT5 387 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 SMG5Q9UPR3 1016 aaKnown RBP18.09■□□□□ 0.49
RNF40-205ENST00000563909 PCDHGA2Q9Y5H1 932 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 PKD1L2Q7Z442 2459 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 FRYQ5TBA9 3013 aa18.09■□□□□ 0.49
RNF40-205ENST00000563909 LAMTOR5O43504 91 aa18.08■□□□□ 0.48
RNF40-205ENST00000563909 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
RNF40-205ENST00000563909 GPR32O75388 356 aa18.08■□□□□ 0.48
RNF40-205ENST00000563909 REC8O95072 547 aa18.08■□□□□ 0.48
RNF40-205ENST00000563909 VTNP04004 478 aa18.08■□□□□ 0.48
RNF40-205ENST00000563909 TGM1P22735 817 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms