RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 GDF11O95390 407 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PRPHP41219 470 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PTK2Q05397 1052 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 ADAM9Q13443 819 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC187-201ENST00000563590 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 GRIPAP1Q4V328 841 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 RFX8Q6ZV50 586 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 TAOK1Q7L7X3 1001 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 TMC3Q7Z5M5 1100 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 LARP4BQ92615 738 aaKnown RBP13.75□□□□□ -0.21
CCDC187-201ENST00000563590 AK8Q96MA6 479 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 MTFR1LQ9H019 292 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 FAM114A2Q9NRY5 505 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 HOMER3Q9NSC5 361 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L15C9J2P7 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L13C9JLJ4 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L11C9JVI0 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L18D6R9N7 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L22D6RA61 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L17D6RBQ6 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L19D6RCP7 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L20D6RJB6 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 RBAK-RBAKDNI3L0D1 243 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 DNAJC8O75937 253 aaPredicted RBP13.75□□□□□ -0.21
CCDC187-201ENST00000563590 FLOT1O75955 427 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PLCG2P16885 1265 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PDE6CP51160 858 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L24Q0WX57 530 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 CALCRLQ16602 461 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L6PQ6QN14 398 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 CCHCR1Q8TD31 782 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 DDX12PQ92771 950 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 TMEM47Q9BQJ4 181 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 ARHGEF10LQ9HCE6 1279 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 C6orf50Q9HD87 102 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 PCDHGC5Q9Y5F6 944 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 COL14A1Q05707 1796 aaKnown RBP13.75□□□□□ -0.21
CCDC187-201ENST00000563590 MYH3P11055 1940 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 STXBP3O00186 592 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 LAD1O00515 517 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 NOL4O94818 638 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 LUC7L3O95232 432 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 MSH2P43246 934 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 RWDD2BP57060 319 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 AGBL2Q5U5Z8 902 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 PAPOLBQ9NRJ5 636 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 BSDC1Q9NW68 430 aaPredicted RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 ETAA1Q9NY74 926 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 COL1A1P02452 1464 aaPredicted RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 SLIT2O94813 1529 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 CFAP73A6NFT4 308 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 MYBP10242 640 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 FKBP3Q00688 224 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 TSNAXIP1Q2TAA8 658 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 ZNF804AQ7Z570 1209 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 FBXO25Q8TCJ0 367 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 TEKT4Q8WW24 435 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 PBKQ96KB5 322 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 BLOC1S4Q9NUP1 217 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 NKIRAS1Q9NYS0 192 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 CEP72Q9P209 647 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 hCG_2014768A0A024R1R8 64 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 TDP2O95551 362 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 SLC9A1P19634 815 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 GRB10Q13322 594 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 TMEM154Q6P9G4 183 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 UNC13DQ70J99 1090 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 RPUSD2Q8IZ73 545 aaKnown RBP13.74□□□□□ -0.21
CCDC187-201ENST00000563590 ZFATQ9P243 1243 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 ASIC3Q9UHC3 531 aa13.74□□□□□ -0.21
CCDC187-201ENST00000563590 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
CCDC187-201ENST00000563590 GUF1Q8N442 669 aaKnown RBP13.73□□□□□ -0.21
CCDC187-201ENST00000563590 P3H4Q92791 437 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 NAF1Q96HR8 494 aaKnown RBP13.73□□□□□ -0.21
CCDC187-201ENST00000563590 TMEM237Q96Q45 408 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 SEMA4AQ9H3S1 761 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 IL17RBQ9NRM6 502 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC187-201ENST00000563590 BARHL2Q9NY43 387 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms