RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SPEGQ15772 3267 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 PNMA6FA0A0J9YX94 578 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 DCDC2BA2VCK2 349 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 NT5C1B-RDH14C9J2C7 533 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 PIK3CDO00329 1044 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 ATMINO43313 823 aaPredicted RBP8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 KINO60870 393 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 CTSAP10619 480 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 TRAF1Q13077 416 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 GRM4Q14833 912 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 SPECC1Q5M775 1068 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 TICAM2Q86XR7 235 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 ECHDC2Q86YB7 292 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 SLC44A3Q8N4M1 653 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 RTKNQ9BST9 563 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 PARD6AQ9NPB6 346 aa8.87□□□□□ -0.99
HERPUD1-206ENST00000563343 ASPMQ8IZT6 3477 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 IGKV6D-21A0A0A0MT36 114 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 PRR5-ARHGAP8B1AHC4 643 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ZBTB42B2RXF5 422 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 STK25O00506 426 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ZNF213O14771 459 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 GPR182O15218 404 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 HOXA2O43364 376 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 LRRN2O75325 713 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 GPR32O75388 356 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 SRFP11831 508 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 KLRC1P26715 233 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 METAP2P50579 478 aaKnown RBP eCLIP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 CLCN4P51793 760 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 CRYBB1P53674 252 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ARHGAP8P85298 464 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 LMNB2Q03252 620 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 WTAPQ15007 396 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 LETM2Q2VYF4 491 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ZNF528Q3MIS6 628 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ODR4Q5SWX8 454 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 IFIT1BQ5T764 474 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 C15orf39Q6ZRI6 1047 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 PLPPR4Q7Z2D5 763 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 ZNF598Q86UK7 904 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 VPS52Q8N1B4 723 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 GPR161Q8N6U8 529 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 PJA1Q8NG27 643 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 GPR152Q8TDT2 470 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 RNF25Q96BH1 459 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 VN1R3Q9BXE9 311 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 SFXN1Q9H9B4 322 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 PKD2L1Q9P0L9 805 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 NCDNQ9UBB6 729 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 GINS2Q9Y248 185 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 SIT1Q9Y3P8 196 aa8.86□□□□□ -0.99
HERPUD1-206ENST00000563343 NOTCH4Q99466 2003 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 PKD1L2Q7Z442 2459 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 SPTLC1O15269 473 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 LILRB3O75022 631 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 LILRB5O75023 590 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 ATG7O95352 703 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 PAPLNO95428 1278 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 POLGP54098 1239 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 BCAR1P56945 870 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 PDAP1Q13442 181 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 MTMR1Q13613 665 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 DDX53Q86TM3 631 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 CABP7Q86V35 215 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 ZBTB44Q8NCP5 570 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 CMASQ8NFW8 434 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 NELL1Q92832 810 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 BORCS6Q96GS4 357 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 CDHR1Q96JP9 859 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 MYADMQ96S97 322 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 OSMRQ99650 979 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 RHOBTB2Q9BYZ6 727 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 FOXQ1Q9C009 403 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 EPC1Q9H2F5 836 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 JPH1Q9HDC5 661 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 JADE2Q9NQC1 790 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 ARHGEF3Q9NR81 526 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 EPS15L1Q9UBC2 864 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 TDRD15B5MCY1 1934 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 GREB1Q4ZG55 1949 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 COL1A2P08123 1366 aa8.85□□□□□ -0.99
HERPUD1-206ENST00000563343 ANKRD11Q6UB99 2663 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 COL4A2P08572 1712 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 PSEN1P49768 467 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 STAT5BP51692 787 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 PDE1AP54750 535 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 STARD6P59095 220 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 ACTR2P61160 394 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 HNRNPUQ00839 825 aaKnown RBP eCLIP8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 TROAPQ12815 778 aa8.84□□□□□ -0.99
HERPUD1-206ENST00000563343 GIT2Q14161 759 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms