RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 OTUD6AQ7L8S5 288 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 SLC7A3Q8WY07 619 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 P2RX5Q93086 422 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 LXNQ9BS40 222 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 TRAIPQ9BWF2 469 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 GCOM2Q9BZD3 368 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 INO80BQ9C086 356 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 CUL9Q8IWT3 2517 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 TTC3P53804 2025 aa13.69□□□□□ -0.22
NSMCE1-204ENST00000563273 HOXA2O43364 376 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 CTNNB1P35222 781 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 MCM2P49736 904 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 NCAPH2Q6IBW4 605 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 NLRP7Q8WX94 980 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 HLA-CQ95604 372 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 CEP170P1Q96L14 293 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 HSD17B14Q9BPX1 270 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 CHST12Q9NRB3 414 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 WRAP73Q9P2S5 460 aaPredicted RBP13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
NSMCE1-204ENST00000563273 XIRP2A4UGR9 3374 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 TMEM150BA6NC51 233 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 SLITRK3O94933 977 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 ZSCAN20P17040 1043 aaPredicted RBP13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 DRP2Q13474 957 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 COL19A1Q14993 1142 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 PLA2G4FQ68DD2 849 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 DYDC2Q96IM9 177 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 SCLT1Q96NL6 688 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 PPP1R16BQ96T49 567 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 ATP6V0A4Q9HBG4 840 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 ANKEF1Q9NU02 776 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 DACT1Q9NYF0 836 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 REV3LO60673 3130 aa13.67□□□□□ -0.22
NSMCE1-204ENST00000563273 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 PRRC2BQ5JSZ5 2229 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 A0A0U1RQF3 1178 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 WNT7AO00755 349 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 ASAP2O43150 1006 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 NCK2O43639 380 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 EOMESO95936 686 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 SFPQP23246 707 aaKnown RBP eCLIP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 NPEPPSP55786 919 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 NOSTRINQ8IVI9 506 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 TCP11Q8WWU5 503 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 PSPC1Q8WXF1 523 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 NSUN3Q9H649 340 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-204ENST00000563273 A0A087WZ62 844 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 SKIP12755 728 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 BMP1P13497 986 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 MUTP22033 750 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 MCM7P33993 719 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 TXKP42681 527 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 FOSBP53539 338 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 GUCY1B3Q02153 619 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 RHPN2Q8IUC4 686 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 SH2D3AQ9BRG2 576 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 FDXACB1Q9BRP7 624 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 TMEM117Q9H0C3 514 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 TMEM60Q9H2L4 133 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 IFT122Q9HBG6 1241 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 TUFT1Q9NNX1 390 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 PLAGL2Q9UPG8 496 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-204ENST00000563273 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 UBE3AQ05086 875 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 EMC2Q15006 297 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 ZNF598Q86UK7 904 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-204ENST00000563273 TPH2Q8IWU9 490 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms