RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 BTBD8Q5XKL5 378 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 ARHGAP36Q6ZRI8 547 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 SH3RF3Q8TEJ3 882 aaPredicted RBP6.46□□□□□ -1.38
SMG1-206ENST00000562668 FBXW5Q969U6 566 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 IPO9Q96P70 1041 aaKnown RBP6.46□□□□□ -1.38
SMG1-206ENST00000562668 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 KATNBL1Q9H079 304 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 TCAF1Q9Y4C2 921 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 NALCNQ8IZF0 1738 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 ARHGEF28Q8N1W1 1705 aaKnown RBP6.45□□□□□ -1.38
SMG1-206ENST00000562668 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.45□□□□□ -1.38
SMG1-206ENST00000562668 PTCH1Q13635 1447 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.45□□□□□ -1.38
SMG1-206ENST00000562668 MAN2B1O00754 1011 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 GJA4P35212 333 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 GUCY1A3Q02108 690 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 USP10Q14694 798 aaKnown RBP6.45□□□□□ -1.38
SMG1-206ENST00000562668 NBPF8Q3BBV2 869 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 ZNF585AQ6P3V2 769 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 SPRED1Q7Z699 444 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 PCDH19Q8TAB3 1148 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 EXOC2Q96KP1 924 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 DEF6Q9H4E7 631 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 CATSPERZQ9NTU4 200 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 RIC8BQ9NVN3 520 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 SIRPGQ9P1W8 387 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 PPP1R1BQ9UD71 204 aaPredicted RBP6.45□□□□□ -1.38
SMG1-206ENST00000562668 PCDHA8Q9Y5H6 950 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 ATP23Q9Y6H3 246 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 DLC1Q96QB1 1528 aa6.45□□□□□ -1.38
SMG1-206ENST00000562668 LRPPRCP42704 1394 aaKnown RBP6.44□□□□□ -1.38
SMG1-206ENST00000562668 YTHDC2Q9H6S0 1430 aaKnown RBP6.44□□□□□ -1.38
SMG1-206ENST00000562668 FAM90A27PA6NNH2 459 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 CUTAO60888 179 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 AMY2AP04746 511 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 ZNF888P0CJ79 500 aaPredicted RBP6.44□□□□□ -1.38
SMG1-206ENST00000562668 PYGMP11217 842 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 AMY2BP19961 511 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 ATP2B1P20020 1258 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 GABREP78334 506 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 R3HDM1Q15032 1099 aaKnown RBP6.44□□□□□ -1.38
SMG1-206ENST00000562668 ZNF568Q3ZCX4 644 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 PTRH1Q86Y79 214 aaKnown RBP6.44□□□□□ -1.38
SMG1-206ENST00000562668 PALM2Q8IXS6 379 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 WWC2-AS2Q96NR7 200 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 LMF1Q96S06 567 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 ARHGAP28Q9P2N2 729 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 CBLCQ9ULV8 474 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 GPRASP1Q5JY77 1395 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 ABCC11Q96J66 1382 aa6.44□□□□□ -1.38
SMG1-206ENST00000562668 NCOA3Q9Y6Q9 1424 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 RALGAPBQ86X10 1494 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 ZNF561-AS1K7EIQ3 104 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 MUSKO15146 869 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
SMG1-206ENST00000562668 ZNF623O75123 536 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 FAM153BP0C7A2 387 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 C6P13671 934 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 PDE6AP16499 860 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 KRT15P19012 456 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 TACR2P21452 398 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 POLD1P28340 1107 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 ST5P78524 1137 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 TOP3AQ13472 1001 aaPredicted RBP6.43□□□□□ -1.38
SMG1-206ENST00000562668 SERINC3Q13530 473 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 C16orf59Q7L2K0 433 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 LRRC37BQ96QE4 947 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 SRRDQ9UH36 339 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 PTPN22Q9Y2R2 807 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 MRPS23Q9Y3D9 190 aaKnown RBP6.43□□□□□ -1.38
SMG1-206ENST00000562668 TMEM94Q12767 1356 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 PLEKHH1Q9ULM0 1364 aa6.43□□□□□ -1.38
SMG1-206ENST00000562668 SRGAP2CP0DJJ0 459 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 AOAHP28039 575 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 ETV4P43268 484 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 RASA3Q14644 834 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 LONRF2Q1L5Z9 754 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 FAM47CQ5HY64 1035 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 DPP8Q6V1X1 898 aaPredicted RBP6.42□□□□□ -1.38
SMG1-206ENST00000562668 EP400NLQ6ZTU2 488 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 Q8TCH9 128 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 GNRHR2Q96P88 292 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 CARD11Q9BXL7 1154 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 SEMA4AQ9H3S1 761 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 ADGRB2O60241 1585 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 TONSLQ96HA7 1378 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 FAM135BQ49AJ0 1406 aa6.42□□□□□ -1.38
SMG1-206ENST00000562668 ESYT3A0FGR9 886 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 CCDC66A2RUB6 948 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 GSTA4O15217 222 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 CRTAMO95727 393 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 PTGS1P23219 599 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 JAM2P57087 298 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 CRY1Q16526 586 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 WDR72Q3MJ13 1102 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 TCTN3Q6NUS6 607 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 CRIP3Q6Q6R5 217 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 OSTM1Q86WC4 334 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 ZC3H7AQ8IWR0 971 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms