RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 KCTD17Q8N5Z5 321 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 LINC00301Q8NCQ3 95 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 DBF4BQ8NFT6 615 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 PSPC1Q8WXF1 523 aaKnown RBP7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 LINC01599Q8WXQ3 324 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 FOXD4L4Q8WXT5 416 aaPredicted RBP7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 PNMA5Q96PV4 448 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 NACC1Q96RE7 527 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 PPP1R16BQ96T49 567 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 MTRQ99707 1265 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 NT5C3AQ9H0P0 336 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 ADAMTS10Q9H324 1103 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 AGO3Q9H9G7 860 aaKnown RBP7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 SUGCTQ9HAC7 445 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 ERVK-5Q9HDB9 667 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 DDX19AQ9NUU7 478 aaKnown RBP7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 GINS2Q9Y248 185 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 ZDHHC9Q9Y397 364 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 COL4A3BPQ9Y5P4 624 aa7.93□□□□□ -1.14
TUBGCP4-203ENST00000562053 CHD7Q9P2D1 2997 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 ARHGEF35A5YM69 484 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 EYA4O95677 639 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 DARSP14868 501 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 MARCKSP29966 332 aaPredicted RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 CD52P31358 61 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 KCNJ6P48051 423 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 DNM2P50570 870 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 NLRP11P59045 1033 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 DEFB103AP81534 67 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 CEBPZQ03701 1054 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 CAPSQ13938 189 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 IKBKEQ14164 716 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 ATL3Q6DD88 541 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 PADI6Q6TGC4 694 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 FAM43BQ6ZT52 329 aaPredicted RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 KCNK18Q7Z418 384 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 CABP7Q86V35 215 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 FAM228AQ86W67 206 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 KRI1Q8N9T8 703 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 MCPH1Q8NEM0 835 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 ASAP3Q8TDY4 903 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 LRRC15Q8TF66 581 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 TCP11Q8WWU5 503 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 NLRP7Q8WX94 980 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 TMEM143Q96AN5 459 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 ZNF396Q96N95 335 aaPredicted RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 SCLT1Q96NL6 688 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 CSRNP2Q9H175 543 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 BHMT2Q9H2M3 363 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 CDHR5Q9HBB8 845 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 SUCLA2Q9P2R7 463 aaPredicted RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 PADI3Q9ULW8 664 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 KIAA1024Q9UPX6 916 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 NOC2LQ9Y3T9 749 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 SRPRBQ9Y5M8 271 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 SLC4A7Q9Y6M7 1214 aa7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 FNDC1Q4ZHG4 1894 aaPredicted RBP7.92□□□□□ -1.14
TUBGCP4-203ENST00000562053 TMEM265A0A087WTH1 108 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 A0A087WWV3 80 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 A0A087WZ62 844 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 E9PMD0 336 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 SPTLC2O15270 562 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 PPP6R2O75170 966 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 RPS6KA5O75582 802 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 PLCG1P19174 1290 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 SFPQP23246 707 aaKnown RBP eCLIP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 EIF4BP23588 611 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 DNAJB2P25686 324 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 ARL2P36404 184 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 UBA7P41226 1012 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 CDC42EP1Q00587 391 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 MXD4Q14582 209 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 KARSQ15046 597 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 STK38Q15208 465 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 GPR153Q6NV75 609 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 IFNLR1Q8IU57 520 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 RHPN2Q8IUC4 686 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 KSR1Q8IVT5 923 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 HERC6Q8IVU3 1022 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 PHOSPHO2Q8TCD6 241 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 KCNG4Q8TDN1 519 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 PRPF31Q8WWY3 499 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 SYMPKQ92797 1274 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 LRCH3Q96II8 777 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 CDK5RAP3Q96JB5 506 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 ZNF668Q96K58 619 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 NLRP4Q96MN2 994 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 CLIC6Q96NY7 704 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 FDXACB1Q9BRP7 624 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 FTHL17Q9BXU8 183 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 PBX4Q9BYU1 374 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 CCSER1Q9C0I3 900 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 POLR3FQ9H1D9 316 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 TSPYL2Q9H2G4 693 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 TMX1Q9H3N1 280 aa7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 RC3H2Q9HBD1 1191 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-203ENST00000562053 IFT122Q9HBG6 1241 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms