RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 FMO5P49326 533 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 JAM2P57087 298 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 PLS1Q14651 629 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 PPP2R5AQ15172 486 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 SUPT20HL1Q3ZLR7 823 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 ZNF746Q6NUN9 644 aaPredicted RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 RPGRIP1Q96KN7 1286 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 MMS19Q96T76 1030 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 SENP7Q9BQF6 1050 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMG1-205ENST00000561947 TEX13BQ9BXU2 312 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 TMEM206Q9H813 350 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 ARFGAP3Q9NP61 516 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 ANKEF1Q9NU02 776 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 AJAP1Q9UKB5 411 aaPredicted RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 SNX12Q9UMY4 172 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 PTPRFP10586 1907 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 A0A087X0T9 212 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 MAFGO15525 162 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 FAM228BP0C875 321 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 PRKCIP41743 596 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 NSUN6Q8TEA1 469 aaKnown RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 DRC1Q96MC2 740 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 INPP4AQ96PE3 977 aaPredicted RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 NOX5Q96PH1 765 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 ACCSQ96QU6 501 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 PNKPQ96T60 521 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 MOV10L1Q9BXT6 1211 aaKnown RBP10.72□□□□□ -0.69
SMG1-205ENST00000561947 ACAD9Q9H845 621 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 AFG3L2Q9Y4W6 797 aa10.72□□□□□ -0.69
SMG1-205ENST00000561947 TMEM150BA6NC51 233 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 EXOC3O60645 756 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 RHOXF2BP0C7M4 288 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 PRLRP16471 622 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 LMNB1P20700 586 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 ANXA13P27216 316 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 PTK2Q05397 1052 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 IQCEQ6IPM2 695 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.69
SMG1-205ENST00000561947 C12orf56Q8IXR9 622 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG1-205ENST00000561947 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 RHOXF2Q9BQY4 288 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 MAF1Q9H063 256 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 ST6GALNAC4Q9H4F1 302 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 CYP39A1Q9NYL5 469 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 ADAMTS1Q9UHI8 967 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 MYPNQ86TC9 1320 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 PAPPA2Q9BXP8 1791 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 SPDYE16A6NNV3 312 aaPredicted RBP10.71□□□□□ -0.69
SMG1-205ENST00000561947 ZNF185O15231 689 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 TUBBP07437 444 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 GTF2BQ00403 316 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 NAB2Q15742 525 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 C10orf76Q5T2E6 689 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 UTP14CQ5TAP6 766 aaKnown RBP10.71□□□□□ -0.69
SMG1-205ENST00000561947 PLA2G4FQ68DD2 849 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 CAGE1Q8TC20 777 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 HNRNPLLQ8WVV9 542 aaKnown RBP10.71□□□□□ -0.69
SMG1-205ENST00000561947 SH2D3AQ9BRG2 576 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 HOXC10Q9NYD6 342 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 PCDHA10Q9Y5I2 948 aa10.71□□□□□ -0.69
SMG1-205ENST00000561947 OTOFQ9HC10 1997 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 BUB1O43683 1085 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 USP2O75604 605 aaPredicted RBP10.71□□□□□ -0.7
SMG1-205ENST00000561947 TBC1D8O95759 1140 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 TRIM49P0CI25 452 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 TRIM49CP0CI26 452 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 KCNA2P16389 499 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 NCKAP1LP55160 1127 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 MYL7Q01449 175 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 BFSP1Q12934 665 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 SH3D19Q5HYK7 790 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 GJB7Q6PEY0 223 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 SMAP1Q8IYB5 467 aaPredicted RBP10.71□□□□□ -0.7
SMG1-205ENST00000561947 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 GPRC5CQ9NQ84 441 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 A1CFQ9NQ94 594 aaKnown RBP10.71□□□□□ -0.7
SMG1-205ENST00000561947 HYOU1Q9Y4L1 999 aa10.71□□□□□ -0.7
SMG1-205ENST00000561947 PDE2AO00408 941 aaPredicted RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 RGS20O76081 388 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 FERP16591 822 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 TCP1P17987 556 aaKnown RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 KLRC1P26715 233 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 NPEPPSP55786 919 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 PEX3P56589 373 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 SNRPFP62306 86 aaKnown RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 CBWD6Q4V339 395 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 CBWD3Q5JTY5 395 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 CBWD5Q5RIA9 395 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 CDHR1Q96JP9 859 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 OSBPL9Q96SU4 736 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 SNCAIPQ9Y6H5 919 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms