RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 DDR2Q16832 855 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 CCDC144BQ3MJ40 725 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 PARP10Q53GL7 1025 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 NOL9Q5SY16 702 aaKnown RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 HEATR6Q6AI08 1181 aaKnown RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 TTLL5Q6EMB2 1281 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 DPH6Q7L8W6 267 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 ANKRD23Q86SG2 305 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 PPFIBP1Q86W92 1011 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 ERO1BQ86YB8 467 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 MFSD4AQ8N468 514 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 PPP1R14AQ96A00 147 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 PRMT6Q96LA8 375 aaPredicted RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 FGD4Q96M96 766 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 ALPK1Q96QP1 1244 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 TESK2Q96S53 571 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 ASPNQ9BXN1 380 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 LNPKQ9C0E8 428 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 ASCC2Q9H1I8 757 aaPredicted RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 ZSWIM4Q9H7M6 989 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 TRMT112Q9UI30 125 aaKnown RBP4.1□□□□□ -1.75
SPG11-225ENST00000561391 PPP2R3BQ9Y5P8 575 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 AOX1Q06278 1338 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 C5orf42Q9H799 3197 aa4.1□□□□□ -1.75
SPG11-225ENST00000561391 USP34Q70CQ2 3546 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 LAMB1P07942 1786 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 KIF20BQ96Q89 1820 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 TRIM43BA6NCK2 446 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 H3BS24 57 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 RFXAPO00287 272 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 MYO1BO43795 1136 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 CYP2B6P20813 491 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 RBM5P52756 815 aaKnown RBP eCLIP4.09□□□□□ -1.75
SPG11-225ENST00000561391 TNK2Q07912 1038 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 SNW1Q13573 536 aaKnown RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 BMS1Q14692 1282 aaKnown RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 NCAPHQ15003 741 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 TCEAL1Q15170 157 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 CLEC16AQ2KHT3 1053 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 STRIP1Q5VSL9 837 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 DTWD2Q8NBA8 298 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 ADCY4Q8NFM4 1077 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.09□□□□□ -1.75
SPG11-225ENST00000561391 KLHL6Q8WZ60 621 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 HERVK_113Q902F9 699 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 ATOH1Q92858 354 aaPredicted RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 BRF1Q92994 677 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 TRIM43Q96BQ3 446 aaPredicted RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 VWCEQ96DN2 955 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 Q96M66 194 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 HSPA12BQ96MM6 686 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 SRPK1Q96SB4 655 aaKnown RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 HAUS7Q99871 368 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 PRDM14Q9GZV8 571 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 ZSWIM5Q9P217 1185 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 COG5Q9UP83 839 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 SUGT1Q9Y2Z0 365 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 PCDHB12Q9Y5F1 795 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 CAPN6Q9Y6Q1 641 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 ZNF804BA4D1E1 1349 aa4.09□□□□□ -1.75
SPG11-225ENST00000561391 IBTKQ9P2D0 1353 aaPredicted RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 COL3A1P02461 1466 aaPredicted RBP4.09□□□□□ -1.75
SPG11-225ENST00000561391 MGAMO43451 1857 aa4.09□□□□□ -1.76
SPG11-225ENST00000561391 SPTBN4Q9H254 2564 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 XIRP2A4UGR9 3374 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 A0A0G2JLL6 359 aaPredicted RBP4.08□□□□□ -1.76
SPG11-225ENST00000561391 WASH4PA8MWX3 477 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 TCP10L2B9ZVM9 353 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 DCXO43602 365 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 EPHX1P07099 455 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 CD247P20963 164 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 CCND3P30281 292 aaPredicted RBP4.08□□□□□ -1.76
SPG11-225ENST00000561391 KIR3DL1P43629 444 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 TCF15Q12870 199 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 DDX10Q13206 875 aaKnown RBP4.08□□□□□ -1.76
SPG11-225ENST00000561391 PPIL2Q13356 520 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 PPP2R5DQ14738 602 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 ST3GAL2Q16842 350 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 CFAP100Q494V2 611 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 SV2CQ496J9 727 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 KRT40Q6A162 431 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 SLC39A5Q6ZMH5 540 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 DNAH12Q6ZR08 3092 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 EEPD1Q7L9B9 569 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 ASCL5Q7RTU5 278 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 DGLUCYQ7Z3D6 616 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 TMC3Q7Z5M5 1100 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 MYO3BQ8WXR4 1341 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 UBE2FQ969M7 185 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 BORCS6Q96GS4 357 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 COX4I2Q96KJ9 171 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 PARK7Q99497 189 aaKnown RBP4.08□□□□□ -1.76
SPG11-225ENST00000561391 APBA2Q99767 749 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 THUMPD2Q9BTF0 503 aaKnown RBP4.08□□□□□ -1.76
SPG11-225ENST00000561391 DSCC1Q9BVC3 393 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 OSBPL2Q9H1P3 480 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 NKX2-4Q9H2Z4 354 aa4.08□□□□□ -1.76
SPG11-225ENST00000561391 SLC28A3Q9HAS3 691 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 448 ms