RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CA3P07451 260 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 TMOD1P28289 359 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 CCT6AP40227 531 aaKnown RBP15.51■□□□□ 0.07
TPM1-230ENST00000561266 POLGP54098 1239 aaPredicted RBP15.51■□□□□ 0.07
TPM1-230ENST00000561266 NFX1Q12986 1120 aaKnown RBP15.51■□□□□ 0.07
TPM1-230ENST00000561266 DSC3Q14574 896 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 GRIN2CQ14957 1233 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 OTUD6AQ7L8S5 288 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
TPM1-230ENST00000561266 APBB2Q92870 758 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 TOP1MTQ969P6 601 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 USP28Q96RU2 1077 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 MINDY3Q9H8M7 445 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 IFT122Q9HBG6 1241 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 PCDHA11Q9Y5I1 949 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 E9PMD0 336 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 UPP2O95045 317 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 XRCC6P12956 609 aaKnown RBP eCLIP15.5■□□□□ 0.07
TPM1-230ENST00000561266 DARSP14868 501 aaKnown RBP15.5■□□□□ 0.07
TPM1-230ENST00000561266 RFC5P40937 340 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 CEBPZQ03701 1054 aaKnown RBP15.5■□□□□ 0.07
TPM1-230ENST00000561266 PAK2Q13177 524 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 USP49Q70CQ1 688 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 MAEAQ7L5Y9 396 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 USP38Q8NB14 1042 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 ASAP3Q8TDY4 903 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 PLIN2Q99541 437 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 ZNF576Q9H609 170 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 DDX19AQ9NUU7 478 aaKnown RBP15.5■□□□□ 0.07
TPM1-230ENST00000561266 KIAA1024Q9UPX6 916 aa15.5■□□□□ 0.07
TPM1-230ENST00000561266 FNDC1Q4ZHG4 1894 aaPredicted RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 NLRC5Q86WI3 1866 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 EPOPA6NHQ4 379 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 USO1O60763 962 aaKnown RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 EFCAB14O75071 495 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 SLC34A2O95436 690 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 AMHP03971 560 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 EIF4BP23588 611 aaKnown RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 ARL2P36404 184 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 HTRA4P83105 476 aaPredicted RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 LAMTOR4Q0VGL1 99 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 GRB10Q13322 594 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 RAB30Q15771 203 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 SPECC1Q5M775 1068 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 ZNF697Q5TEC3 545 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 ARL6IP4Q66PJ3 421 aaKnown RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 NLRP7Q8WX94 980 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 SLC7A3Q8WY07 619 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 CHAMP1Q96JM3 812 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 NLRP4Q96MN2 994 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 MTRQ99707 1265 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 TSPYL2Q9H2G4 693 aaPredicted RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 CERS4Q9HA82 394 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 MSRAQ9UJ68 235 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 DBR1Q9UK59 544 aaKnown RBP15.49■□□□□ 0.07
TPM1-230ENST00000561266 ZDHHC9Q9Y397 364 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 COL4A3BPQ9Y5P4 624 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 KIAA1671Q9BY89 1806 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 TCHHQ07283 1943 aa15.49■□□□□ 0.07
TPM1-230ENST00000561266 RFXAPO00287 272 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 TLL1O43897 1013 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 SRGAP2CP0DJJ0 459 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 GLRA2P23416 452 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 GATMP50440 423 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 DNM2P50570 870 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 TAP1Q03518 808 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 FOXD4L6Q3SYB3 417 aaPredicted RBP15.48■□□□□ 0.07
TPM1-230ENST00000561266 FOXD4L3Q6VB84 417 aaPredicted RBP15.48■□□□□ 0.07
TPM1-230ENST00000561266 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 CLIC6Q96NY7 704 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 CDX2Q99626 313 aaPredicted RBP15.48■□□□□ 0.07
TPM1-230ENST00000561266 ADAM2Q99965 735 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 BHMT2Q9H2M3 363 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 TFIP11Q9UBB9 837 aaKnown RBP15.48■□□□□ 0.07
TPM1-230ENST00000561266 FBXO2Q9UK22 296 aaPredicted RBP15.48■□□□□ 0.07
TPM1-230ENST00000561266 PPME1Q9Y570 386 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 COL6A3P12111 3177 aa15.48■□□□□ 0.07
TPM1-230ENST00000561266 EYSQ5T1H1 3165 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 C9IYK1 514 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 GPR182O15218 404 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 DGAT1O75907 488 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
TPM1-230ENST00000561266 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
TPM1-230ENST00000561266 IBSPP21815 317 aaPredicted RBP15.47■□□□□ 0.07
TPM1-230ENST00000561266 CAPSQ13938 189 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 HYIQ5T013 277 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 HAUS3Q68CZ6 603 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 PADI6Q6TGC4 694 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 PSPC1Q8WXF1 523 aaKnown RBP15.47■□□□□ 0.07
TPM1-230ENST00000561266 MYLIPQ8WY64 445 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 RAD9AQ99638 391 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 ZBED2Q9BTP6 218 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 POLR3FQ9H1D9 316 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms