RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 EXOC8Q8IYI6 725 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 SMC1BQ8NDV3 1235 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 KCNN1Q92952 543 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 PCYT2Q99447 389 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 GPR20Q99678 358 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 MKNK1Q9BUB5 465 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 NAA15Q9BXJ9 866 aaKnown RBP18.83■□□□□ 0.6
HDDC3-206ENST00000561036 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 EMSYQ7Z589 1322 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 NOP56O00567 594 aaKnown RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 SORBS3O60504 671 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 GYPCP04921 128 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 TCF7P36402 384 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 DMP1Q13316 513 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 TAF1CQ15572 869 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 TAPT1Q6NXT6 567 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 HAUS6Q7Z4H7 955 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 C12orf56Q8IXR9 622 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 EMID1Q96A84 441 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 BAG1Q99933 345 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 GPBP1L1Q9HC44 474 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 DMAC2Q9NW81 257 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 ARMCX3Q9UH62 379 aaPredicted RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 EXOC7Q9UPT5 735 aa18.82■□□□□ 0.6
HDDC3-206ENST00000561036 MYH9P35579 1960 aaKnown RBP18.82■□□□□ 0.6
HDDC3-206ENST00000561036 FAM155AB1AL88 458 aaPredicted RBP18.81■□□□□ 0.6
HDDC3-206ENST00000561036 ARHGAP6O43182 974 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 EPB41P11171 864 aaKnown RBP18.81■□□□□ 0.6
HDDC3-206ENST00000561036 FECHP22830 423 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 PEX3P56589 373 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 KCNA1Q09470 495 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 SYCP1Q15431 976 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 TARBP2Q15633 366 aaKnown RBP18.81■□□□□ 0.6
HDDC3-206ENST00000561036 MORN1Q5T089 497 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 SYCP3Q8IZU3 236 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 BBXQ8WY36 941 aaPredicted RBP18.81■□□□□ 0.6
HDDC3-206ENST00000561036 MAML3Q96JK9 1138 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 IFT74Q96LB3 600 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 SPATA33Q96N06 139 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 SH2D3AQ9BRG2 576 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 DHX33Q9H6R0 707 aaKnown RBP18.81■□□□□ 0.6
HDDC3-206ENST00000561036 GPRC5CQ9NQ84 441 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 XPNPEP1Q9NQW7 623 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 CPA4Q9UI42 421 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 CAPN11Q9UMQ6 739 aa18.81■□□□□ 0.6
HDDC3-206ENST00000561036 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDDC3-206ENST00000561036 A0A1W2PQJ5 194 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 TLR2O60603 784 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 GH1P01241 217 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 CASP14P31944 242 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 PSMC2P35998 433 aaKnown RBP18.8■□□□□ 0.6
HDDC3-206ENST00000561036 NPTX2P47972 431 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 POLGP54098 1239 aaPredicted RBP18.8■□□□□ 0.6
HDDC3-206ENST00000561036 ADKP55263 362 aaKnown RBP18.8■□□□□ 0.6
HDDC3-206ENST00000561036 EMC2Q15006 297 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 MTERF2Q49AM1 385 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 C17orf99Q6UX52 265 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 TMEM139Q8IV31 216 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 CEP89Q96ST8 783 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 KATNBL1Q9H079 304 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 SMARCAD1Q9H4L7 1026 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 ZFYVE28Q9HCC9 887 aa18.8■□□□□ 0.6
HDDC3-206ENST00000561036 CCP110O43303 1012 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 GAS2O43903 313 aaKnown RBP18.79■□□□□ 0.6
HDDC3-206ENST00000561036 SNAI1O95863 264 aaPredicted RBP18.79■□□□□ 0.6
HDDC3-206ENST00000561036 HOXC6P09630 235 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 TM4SF4P48230 202 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 FXR1P51114 621 aaKnown RBP eCLIP18.79■□□□□ 0.6
HDDC3-206ENST00000561036 ARHGAP1Q07960 439 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 TRMT1LQ7Z2T5 733 aaKnown RBP18.79■□□□□ 0.6
HDDC3-206ENST00000561036 TMEM161BQ8NDZ6 487 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 ATP8B4Q8TF62 1192 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 SLC7A3Q8WY07 619 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 TINF2Q9BSI4 451 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 ABHD16BQ9H3Z7 469 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 KMT5AQ9NQR1 393 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 PDGFCQ9NRA1 345 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 SIK3Q9Y2K2 1263 aa18.79■□□□□ 0.6
HDDC3-206ENST00000561036 LUC7L2Q9Y383 392 aaKnown RBP18.79■□□□□ 0.6
HDDC3-206ENST00000561036 TMEM88BA6NKF7 163 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 CCDC169A6NNP5 214 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 KIF3CO14782 793 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.6
HDDC3-206ENST00000561036 SLC16A4O15374 487 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 AKAP3O75969 853 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 MAP2K5Q13163 448 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 PPP2R5AQ15172 486 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 HSDL1Q3SXM5 330 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 OR8K1Q8NGG5 319 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 CPLX3Q8WVH0 158 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 GLG1Q92896 1179 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 TTYH3Q9C0H2 523 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 POLR3FQ9H1D9 316 aaPredicted RBP18.78■□□□□ 0.6
HDDC3-206ENST00000561036 TBX20Q9UMR3 447 aa18.78■□□□□ 0.6
HDDC3-206ENST00000561036 FRMD4BQ9Y2L6 1034 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms