RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ADAMTS10Q9H324 1103 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 TBC1D22BQ9NU19 505 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 DZANK1Q9NVP4 752 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 RBM28Q9NW13 759 aaKnown RBP21.05■□□□□ 0.96
TPM1-226ENST00000560959 IRAK3Q9Y616 596 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 A0A0U1RQF3 1178 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 IPO5O00410 1097 aaKnown RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 CYP3A4P08684 503 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 ALDH7A1P49419 539 aaKnown RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 NLRP11P59045 1033 aaKnown RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 SYNE3Q6ZMZ3 975 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 PLA2G4DQ86XP0 818 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 CKAP2LQ8IYA6 745 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 SMAP1Q8IYB5 467 aaPredicted RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 TDRD5Q8NAT2 981 aaKnown RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 NKD2Q969F2 451 aaPredicted RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 PGBD1Q96JS3 809 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 MRPL9Q9BYD2 267 aaKnown RBP21.04■□□□□ 0.96
TPM1-226ENST00000560959 CDH22Q9UJ99 828 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 SPTBN4Q9H254 2564 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 VPS13AQ96RL7 3174 aa21.04■□□□□ 0.96
TPM1-226ENST00000560959 SMCO2A6NFE2 343 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 FAM86B1E9PN63 330 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 DDX39AO00148 427 aaKnown RBP21.03■□□□□ 0.96
TPM1-226ENST00000560959 CXCL14O95715 111 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 PBX3P40426 434 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 ZNF598Q86UK7 904 aaKnown RBP21.03■□□□□ 0.96
TPM1-226ENST00000560959 LINC01465Q8N7H1 131 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 MAP7D2Q96T17 732 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 PPP1R16BQ96T49 567 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 MFSD1Q9H3U5 465 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 LIMD1Q9UGP4 676 aa21.03■□□□□ 0.96
TPM1-226ENST00000560959 FAM186AA6NE01 2351 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 MYO10Q9HD67 2058 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 IGLV3-22A0A075B6J6 115 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 POLGP54098 1239 aaPredicted RBP21.02■□□□□ 0.96
TPM1-226ENST00000560959 FUT2Q10981 343 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 CLLU1OSQ5K130 101 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 EFCAB12Q6NXP0 572 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 CRYGNQ8WXF5 182 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 FAM167AQ96KS9 214 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 CYP26B1Q9NR63 512 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 BARHL2Q9NY43 387 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 PCDHA10Q9Y5I2 948 aa21.02■□□□□ 0.96
TPM1-226ENST00000560959 CNTNAP5Q8WYK1 1306 aa21.02■□□□□ 0.95
TPM1-226ENST00000560959 DCHS1Q96JQ0 3298 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 PSAPP07602 524 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 BCAR1P56945 870 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 MICU3Q86XE3 530 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 EXOC6Q8TAG9 804 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 TMEM169Q96HH4 297 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 ZNF577Q9BSK1 485 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 DACT1Q9NYF0 836 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 DBR1Q9UK59 544 aaKnown RBP21.01■□□□□ 0.95
TPM1-226ENST00000560959 AKT3Q9Y243 479 aa21.01■□□□□ 0.95
TPM1-226ENST00000560959 ASGR2P07307 311 aa21■□□□□ 0.95
TPM1-226ENST00000560959 CLCN3P51790 818 aa21■□□□□ 0.95
TPM1-226ENST00000560959 CDC42EP1Q00587 391 aa21■□□□□ 0.95
TPM1-226ENST00000560959 SETQ01105 290 aaPredicted RBP21■□□□□ 0.95
TPM1-226ENST00000560959 COL9A3Q14050 684 aaPredicted RBP21■□□□□ 0.95
TPM1-226ENST00000560959 RARS2Q5T160 578 aaKnown RBP21■□□□□ 0.95
TPM1-226ENST00000560959 FRMD5Q7Z6J6 570 aa21■□□□□ 0.95
TPM1-226ENST00000560959 RAB11FIP4Q86YS3 637 aa21■□□□□ 0.95
TPM1-226ENST00000560959 VPS52Q8N1B4 723 aa21■□□□□ 0.95
TPM1-226ENST00000560959 TRAIPQ9BWF2 469 aa21■□□□□ 0.95
TPM1-226ENST00000560959 ZBP1Q9H171 429 aa21■□□□□ 0.95
TPM1-226ENST00000560959 SMOC2Q9H3U7 446 aa21■□□□□ 0.95
TPM1-226ENST00000560959 CHST12Q9NRB3 414 aa21■□□□□ 0.95
TPM1-226ENST00000560959 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
TPM1-226ENST00000560959 EVPLQ92817 2033 aa21■□□□□ 0.95
TPM1-226ENST00000560959 SLC27A2O14975 620 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 CTSAP10619 480 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 DARSP14868 501 aaKnown RBP20.99■□□□□ 0.95
TPM1-226ENST00000560959 AOC1P19801 751 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 ID4P47928 161 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 APOA5Q6Q788 366 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 DDX53Q86TM3 631 aaKnown RBP20.99■□□□□ 0.95
TPM1-226ENST00000560959 PPFIBP1Q86W92 1011 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 ADSSL1Q8N142 457 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 TMEM87AQ8NBN3 555 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 HELQQ8TDG4 1101 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 SLC22A17Q8WUG5 538 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 ACSF2Q96CM8 615 aaPredicted RBP20.99■□□□□ 0.95
TPM1-226ENST00000560959 RTP3Q9BQQ7 232 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 LSG1Q9H089 658 aaKnown RBP20.99■□□□□ 0.95
TPM1-226ENST00000560959 NRBP2Q9NSY0 501 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 STK39Q9UEW8 545 aa20.99■□□□□ 0.95
TPM1-226ENST00000560959 METAP2P50579 478 aaKnown RBP eCLIP20.98■□□□□ 0.95
TPM1-226ENST00000560959 GPC3P51654 580 aa20.98■□□□□ 0.95
TPM1-226ENST00000560959 NECTIN1Q15223 517 aa20.98■□□□□ 0.95
TPM1-226ENST00000560959 OTOP3Q7RTS5 596 aa20.98■□□□□ 0.95
TPM1-226ENST00000560959 C12orf76Q8N812 135 aaPredicted RBP20.98■□□□□ 0.95
TPM1-226ENST00000560959 RNF169Q8NCN4 708 aa20.98■□□□□ 0.95
TPM1-226ENST00000560959 GABBR1Q9UBS5 961 aa20.98■□□□□ 0.95
TPM1-226ENST00000560959 TCEAL9Q9UHQ7 104 aa20.98■□□□□ 0.95
TPM1-226ENST00000560959 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.97■□□□□ 0.95
TPM1-226ENST00000560959 WEE2P0C1S8 567 aa20.97■□□□□ 0.95
TPM1-226ENST00000560959 TDGQ13569 410 aa20.97■□□□□ 0.95
TPM1-226ENST00000560959 CREB3L3Q68CJ9 461 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms