RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SMCR8Q8TEV9 937 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 ATRIPQ8WXE1 791 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 RRP36Q96EU6 259 aaKnown RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 CCDC43Q96MW1 224 aaKnown RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 ZIM3Q96PE6 472 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 LRRC1Q9BTT6 524 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 NDST4Q9H3R1 872 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 BMP2KQ9NSY1 1161 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 LRWD1Q9UFC0 647 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 PARP2Q9UGN5 583 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 CPA4Q9UI42 421 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 ODF2LQ9ULJ1 636 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 COL11A1P12107 1806 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 RLFQ13129 1914 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 ESYT2A0FGR8 921 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 C5orf60A6NFR6 353 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 PLA2G6O60733 806 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 RASSF9O75901 435 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 ATP5DP30049 168 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 MCM7P33993 719 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 FNTAP49354 379 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 ASIC1P78348 528 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 LACTBP83111 547 aaPredicted RBP9.31□□□□□ -0.92
CCDC33-209ENST00000560565 PDE4DQ08499 809 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 PDCLQ13371 301 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 RIPK1Q13546 671 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 MTMR2Q13614 643 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 ITIH4Q14624 930 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
CCDC33-209ENST00000560565 ODF2Q5BJF6 829 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 TREML2Q5T2D2 321 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 SFMBT2Q5VUG0 894 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 PIK3AP1Q6ZUJ8 805 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 USP49Q70CQ1 688 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 SV2BQ7L1I2 683 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 CCDC13Q8IYE1 715 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 SMYD4Q8IYR2 804 aaPredicted RBP9.31□□□□□ -0.92
CCDC33-209ENST00000560565 STAG2Q8N3U4 1231 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 ACTRT1Q8TDG2 376 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 GLT8D2Q9H1C3 349 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 BLZF1Q9H2G9 400 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
CCDC33-209ENST00000560565 MCM8Q9UJA3 840 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 TMX2Q9Y320 296 aa9.31□□□□□ -0.92
CCDC33-209ENST00000560565 LOC285556D6RIA3 1793 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CCDC169A6NNP5 214 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 E7EVH7 732 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 PPP1R12AO14974 1030 aaPredicted RBP9.3□□□□□ -0.92
CCDC33-209ENST00000560565 TRAPPC3O43617 180 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CYTH3O43739 400 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 SRGAP2O75044 1071 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 GNRH1P01148 92 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 OR52Z1P0C646 297 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 OSBPP22059 807 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 PPP2R2AP63151 447 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 SATB1Q01826 763 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 GUCY2DQ02846 1103 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 ITGB3BPQ13352 177 aaPredicted RBP9.3□□□□□ -0.92
CCDC33-209ENST00000560565 XRCC4Q13426 336 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 RPS6KA1Q15418 735 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 NAB2Q15742 525 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 PTPN21Q16825 1174 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 TTMPQ5BVD1 217 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CENPPQ6IPU0 288 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 PDXDC1Q6P996 788 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 USP17L2Q6R6M4 530 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 BTNL9Q6UXG8 535 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 UNC13DQ70J99 1090 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CPLX4Q7Z7G2 160 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CABP7Q86V35 215 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 IRF2BP1Q8IU81 584 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 SIAH1Q8IUQ4 282 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 LRRC47Q8N1G4 583 aaKnown RBP9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CCDC82Q8N4S0 544 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 MTMR8Q96EF0 704 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 CYFIP2Q96F07 1278 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 IFT74Q96LB3 600 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 JPH2Q9BR39 696 aaPredicted RBP9.3□□□□□ -0.92
CCDC33-209ENST00000560565 LACRTQ9GZZ8 138 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 EPB41L5Q9HCM4 733 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 RNF216Q9NWF9 866 aaPredicted RBP9.3□□□□□ -0.92
CCDC33-209ENST00000560565 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 SAMD15Q9P1V8 674 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 RASAL2Q9UJF2 1139 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms