RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 SUMF1Q8NBK3 374 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 HELQQ8TDG4 1101 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 IGDCC4Q8TDY8 1250 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 RSAD2Q8WXG1 361 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 RUBCNQ92622 972 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 HINFPQ9BQA5 517 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 LNPKQ9C0E8 428 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 DIAPH3Q9NSV4 1193 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 DLGAP2Q9P1A6 1054 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 IGSF9Q9P2J2 1179 aa10.21□□□□□ -0.77
RABGGTA-217ENST00000560521 COL1A2P08123 1366 aa10.21□□□□□ -0.78
RABGGTA-217ENST00000560521 COL4A3Q01955 1670 aa10.21□□□□□ -0.78
RABGGTA-217ENST00000560521 ERICH2A1L162 156 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 SPDYE3A6NKU9 549 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 C22orf31O95567 290 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CCNE2O96020 404 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CYP21A2P08686 494 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 SP9P0CG40 484 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CTSAP10619 480 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 ZSCAN20P17040 1043 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 ALDH7A1P49419 539 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 TRDNQ13061 729 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 BMS1Q14692 1282 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 LETM2Q2VYF4 491 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CCDC149Q6ZUS6 474 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CATIPQ7Z7H3 387 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CABP7Q86V35 215 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CCDC60Q8IWA6 550 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 PLEKHM2Q8IWE5 1019 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CMTR1Q8N1G2 835 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 RNF169Q8NCN4 708 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 TMEM169Q96HH4 297 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 SDF4Q9BRK5 362 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 MYL10Q9BUA6 226 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 AGO4Q9HCK5 861 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 CA14Q9ULX7 337 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 TAF6LQ9Y6J9 622 aa10.2□□□□□ -0.78
RABGGTA-217ENST00000560521 NOTCH4Q99466 2003 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 A0A0U1RQF3 1178 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 DDX39AO00148 427 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 PLEKHA8P1O95397 391 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 DCNP07585 359 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 ATXN1P54253 815 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 ANTXR2P58335 489 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 NLRP11P59045 1033 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 TBC1D8BQ0IIM8 1120 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 GIT2Q14161 759 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 SPECC1Q5M775 1068 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 DDX53Q86TM3 631 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 C1orf210Q8IVY1 113 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 SLC44A3Q8N4M1 653 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 METTL13Q8N6R0 699 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 TMEM87AQ8NBN3 555 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 BCL7CQ8WUZ0 217 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 IGSF21Q96ID5 467 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 MAP3K14Q99558 947 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 VN1R3Q9BXE9 311 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 ADAMTS10Q9H324 1103 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 OSBPL3Q9H4L5 887 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 SFXN1Q9H9B4 322 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 TBC1D17Q9HA65 648 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 ZNF302Q9NR11 478 aa10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 SEC63Q9UGP8 760 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-217ENST00000560521 CACNA1GO43497 2377 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 CFAP47Q6ZTR5 3102 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 hCG_1642624A0A1W2PR95 340 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 POTEMA6NI47 508 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 HIP1O00291 1037 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 BACH1O14867 736 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 DHX15O43143 795 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 GLULP15104 373 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 EIF4BP23588 611 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 CLCN4P51793 760 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 POLGP54098 1239 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 HDAC1Q13547 482 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 CEP55Q53EZ4 464 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 FAM160B1Q5W0V3 765 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 SWSAP1Q6NVH7 229 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 PDXDC2PQ6P474 469 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 ZC3H14Q6PJT7 736 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 PPFIBP1Q86W92 1011 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 MAML2Q8IZL2 1156 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 ZNF654Q8IZM8 581 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 LINC01465Q8N7H1 131 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 CTCFLQ8NI51 663 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 KLHL5Q96PQ7 755 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 LZTS2Q9BRK4 669 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 GPR179Q6PRD1 2367 aa10.18□□□□□ -0.78
RABGGTA-217ENST00000560521 E7EWF7 191 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 MEIS1O00470 390 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 LILRB3O75022 631 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 ZC3H11AO75152 810 aaKnown RBP eCLIP10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 GALTP07902 379 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 FGFR4P22455 802 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 CLCN3P51790 818 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 PTH1RQ03431 593 aa10.17□□□□□ -0.78
RABGGTA-217ENST00000560521 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms