RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 OATP04181 439 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PLEKP08567 350 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 WDR59Q6PJI9 974 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 DHX37Q8IY37 1157 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PPP1R13LQ8WUF5 828 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 DRC1Q96MC2 740 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ERGIC2Q96RQ1 377 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 STRA6Q9BX79 667 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PPP2R2CQ9Y2T4 447 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 LOXHD1Q8IVV2 1947 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 LRRC37A2A6NM11 1700 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 DENND3A2RUS2 1198 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 SLC9A1P19634 815 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 ADCYAP1R1P41586 468 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 DMP1Q13316 513 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 ZNF792Q3KQV3 632 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 XKR3Q5GH77 459 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 CELF3Q5SZQ8 465 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 ZC3H3Q8IXZ2 948 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 TRAPPC12Q8WVT3 735 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 SEPT1Q8WYJ6 367 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 PARK7Q99497 189 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 GPR20Q99678 358 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 IRX2Q9BZI1 471 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 LZTFL1Q9NQ48 299 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 KMT5AQ9NQR1 393 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.93□□□□□ -0.56e-8■■■□□ 19.2
SNRPA1-211ENST00000560433 PLXNB2O15031 1838 aa11.93□□□□□ -0.5
SNRPA1-211ENST00000560433 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 EXOC3O60645 756 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 TGFB3P10600 412 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 EPB41P11171 864 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 XRCC5P13010 732 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 ENOX2Q16206 610 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 HS2ST1Q7LGA3 356 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 REXO1L1PQ8IX06 675 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 FAM186BQ8IYM0 893 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 TMEM161BQ8NDZ6 487 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 LSM14BQ9BX40 385 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 UNCXA6NJT0 531 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 DGAT1O75907 488 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 GNA14O95837 355 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 RPL13P26373 211 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 COPB2P35606 906 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 DLG4P78352 724 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 EMC2Q15006 297 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 CCDC62Q6P9F0 684 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 SHCBP1Q8NEM2 672 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 NPLOC4Q8TAT6 608 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 SAAL1Q96ER3 474 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 MPHOSPH6Q99547 160 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 ATP6V0A4Q9HBG4 840 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 PDLIM7Q9NR12 457 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 PLXNA1Q9UIW2 1896 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 ARID2Q68CP9 1835 aa11.92□□□□□ -0.5
SNRPA1-211ENST00000560433 IGKV6D-21A0A0A0MT36 114 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 FAM170AA1A519 330 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 LRRC53A6NM62 1247 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 LRRN2O75325 713 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 NOL4O94818 638 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 GJB1P08034 283 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 NCKAP1LP55160 1127 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 CHMP4BP1P59074 171 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 POLR2FP61218 127 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 GTF2BQ00403 316 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 ARID5AQ03989 594 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 TRIM14Q14142 442 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 TAPT1Q6NXT6 567 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 SYT10Q6XYQ8 523 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 STXBP4Q6ZWJ1 553 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 LRRC71Q8N4P6 559 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 SLC35C1Q96A29 364 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 FAM84AQ96KN4 292 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 MAF1Q9H063 256 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 TBX20Q9UMR3 447 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 DKC1O60832 514 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 ADSSP30520 456 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 SMTNP53814 917 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 RGMBQ6NW40 437 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 GJB7Q6PEY0 223 aa11.91□□□□□ -0.5
SNRPA1-211ENST00000560433 FOXR2Q6PJQ5 311 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms