RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 GALNT17Q6IS24 598 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 EFCAB12Q6NXP0 572 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
SMAD3-214ENST00000560402 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 RUFY3Q7L099 469 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 ADGRD2Q7Z7M1 963 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 LRRC43Q8N309 656 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 COLGALT1Q8NBJ5 622 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 DAGLBQ8NCG7 672 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 RSPH1Q8WYR4 309 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 SLC5A5Q92911 643 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 C5orf42Q9H799 3197 aa15.28■□□□□ 0.04
SMAD3-214ENST00000560402 CPLX1O14810 134 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 ZNF862O60290 1169 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 FGF18O76093 207 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.04
SMAD3-214ENST00000560402 IBSPP21815 317 aaPredicted RBP15.27■□□□□ 0.04
SMAD3-214ENST00000560402 EIF4BP23588 611 aaKnown RBP15.27■□□□□ 0.04
SMAD3-214ENST00000560402 NRIP1P48552 1158 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 SSRP1Q08945 709 aaKnown RBP15.27■□□□□ 0.04
SMAD3-214ENST00000560402 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 Q4G0T1 1027 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 TBCKQ8TEA7 893 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 PPP1R16BQ96T49 567 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 ADAMTS10Q9H324 1103 aa15.27■□□□□ 0.04
SMAD3-214ENST00000560402 NCOA5Q9HCD5 579 aaKnown RBP15.27■□□□□ 0.04
SMAD3-214ENST00000560402 CHMP2AO43633 222 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 GPC3P51654 580 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 NLRP11P59045 1033 aaKnown RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 CDC42EP1Q00587 391 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 FAM102BQ5T8I3 360 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 TRMT1LQ7Z2T5 733 aaKnown RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 ABI1Q8IZP0 508 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 ZNF274Q96GC6 653 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 SCLT1Q96NL6 688 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 TM6SF1Q9BZW5 370 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 KCNH6Q9H252 994 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 UNC45AQ9H3U1 944 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 CWH43Q9H720 699 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 TLE6Q9H808 572 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 TYW1Q9NV66 732 aaKnown RBP15.26■□□□□ 0.03
SMAD3-214ENST00000560402 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
SMAD3-214ENST00000560402 MUC6Q6W4X9 2439 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 CYP3A7-CYP3A51PA0A087WV96 503 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 CARNS1A5YM72 827 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 FSCN2O14926 492 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 PSMD10O75832 226 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 GLP2RO95838 553 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 FGFR1P11362 822 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 DARSP14868 501 aaKnown RBP15.25■□□□□ 0.03
SMAD3-214ENST00000560402 CYP3A7P24462 503 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-214ENST00000560402 TARBP2Q15633 366 aaKnown RBP15.25■□□□□ 0.03
SMAD3-214ENST00000560402 UGCGQ16739 394 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 DUSP6Q16828 381 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 XKR3Q5GH77 459 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 MIER3Q7Z3K6 550 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 BLIDQ8IZY5 108 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 LRRC71Q8N4P6 559 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 MICAL1Q8TDZ2 1067 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 MRPS27Q92552 414 aaKnown RBP15.25■□□□□ 0.03
SMAD3-214ENST00000560402 MBOAT7Q96N66 472 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 MRPL9Q9BYD2 267 aaKnown RBP15.25■□□□□ 0.03
SMAD3-214ENST00000560402 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 CLEC1BQ9P126 229 aa15.25■□□□□ 0.03
SMAD3-214ENST00000560402 PUF60Q9UHX1 559 aaKnown RBP15.25■□□□□ 0.03
SMAD3-214ENST00000560402 M0R2N6 131 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 EDIL3O43854 480 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 PTMSP20962 102 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 B3GNT9Q6UX72 402 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 RBM23Q86U06 439 aaKnown RBP15.24■□□□□ 0.03
SMAD3-214ENST00000560402 NLRP7Q8WX94 980 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 ZNF558Q96NG5 402 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 CASD1Q96PB1 797 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-214ENST00000560402 NIFKQ9BYG3 293 aaKnown RBP15.24■□□□□ 0.03
SMAD3-214ENST00000560402 NGRNQ9NPE2 291 aaKnown RBP15.24■□□□□ 0.03
SMAD3-214ENST00000560402 RNF19AQ9NV58 838 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 SEPT9Q9UHD8 586 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-214ENST00000560402 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-214ENST00000560402 ZNF318Q5VUA4 2279 aa15.24■□□□□ 0.03
SMAD3-214ENST00000560402 ARID2Q68CP9 1835 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 A0A0U1RQF3 1178 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 DKC1O60832 514 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 PPFIA3O75145 1194 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 CDKL5O76039 1030 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 TDP2O95551 362 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 EOMESO95936 686 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms