RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 PGK2P07205 417 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 DLG4P78352 724 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 KRT76Q01546 638 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 MKRN3Q13064 507 aaKnown RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 WDR78Q5VTH9 848 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 SFMBT2Q5VUG0 894 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CCDC170Q8IYT3 715 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 ELMO3Q96BJ8 720 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CAPZA3Q96KX2 299 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 MOV10L1Q9BXT6 1211 aaKnown RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 HAUS4Q9H6D7 363 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 JPH1Q9HDC5 661 aaPredicted RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 LARSQ9P2J5 1176 aaKnown RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 PCDHA13Q9Y5I0 950 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 PCDHA10Q9Y5I2 948 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 UCHL3P15374 230 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 HNRNPH3P31942 346 aaKnown RBP15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 OAZ1P54368 228 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 DHX37Q8IY37 1157 aaKnown RBP15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 BSNDQ8WZ55 320 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 FAM84AQ96KN4 292 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 CEP170P1Q96L14 293 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 SEPT9Q9UHD8 586 aaPredicted RBP15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 SALL4Q9UJQ4 1053 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 MOCS3O95396 460 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 JAK3P52333 1124 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 RBM46Q8TBY0 533 aaKnown RBP15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 SPAG5Q96R06 1193 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 TXNRD2Q9NNW7 524 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 SEL1LQ9UBV2 794 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 ADAMTS1Q9UHI8 967 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 WDR90Q96KV7 1748 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
CARMIL3-203ENST00000560349 BUB1O43683 1085 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 KRT86O43790 486 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 PPP1R37O75864 691 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 SEC31AO94979 1220 aaKnown RBP15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 MUTP22033 750 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 HOXA7P31268 230 aaPredicted RBP15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 VAV2P52735 878 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 ACTR2P61160 394 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 LBX2Q6XYB7 198 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 HAUS6Q7Z4H7 955 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 GPRASP2Q96D09 838 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 KCND2Q9NZV8 630 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 PLS3P13797 630 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 IREB2P48200 963 aaKnown RBP15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 DNA2P51530 1060 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 SH3D19Q5HYK7 790 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 DPY19L2P1Q6NXN4 242 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 TMCO3Q6UWJ1 677 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 PACSIN1Q9BY11 444 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 ASCC2Q9H1I8 757 aaPredicted RBP15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 SLC9A2Q9UBY0 812 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 DBR1Q9UK59 544 aaKnown RBP15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 FRMD4BQ9Y2L6 1034 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 PTPRFP10586 1907 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 A0A087X0T9 212 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 ZNF185O15231 689 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 FAM228BP0C875 321 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 EPHX2P34913 555 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 PRKCEQ02156 737 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 KLHL30Q0D2K2 578 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 MTERF2Q49AM1 385 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 KLHDC7AQ5VTJ3 777 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 KCTD17Q8N5Z5 321 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 CDC23Q9UJX2 597 aa15.4■□□□□ 0.06
CARMIL3-203ENST00000560349 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 SLC16A3O15427 465 aaKnown RBP15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 MAGEA1P43355 309 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 CDK17Q00537 523 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 PTPROQ16827 1216 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 STRA6Q9BX79 667 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 SPATC1LQ9H0A9 340 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 SIX2Q9NPC8 291 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 ARGLU1Q9NWB6 273 aaPredicted RBP15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 LCTP09848 1927 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 SFNP31947 248 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 PTK2Q05397 1052 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 ASTE1Q2TB18 679 aaPredicted RBP15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 ZNF746Q6NUN9 644 aaPredicted RBP15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 GBP6Q6ZN66 633 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 STXBP4Q6ZWJ1 553 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 OPTNQ96CV9 577 aa15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
CARMIL3-203ENST00000560349 ADGRA3Q8IWK6 1321 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 NPTX2P47972 431 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms