RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 NEFHP12036 1026 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 HSPA9P38646 679 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 TOB1P50616 345 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 RWDD2BP57060 319 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CTBSQ01459 385 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ADCY2Q08462 1091 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 C2orf54Q08AI8 447 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ITGB3BPQ13352 177 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 KCNJ12Q14500 433 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 KCNB1Q14721 858 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 PTPN21Q16825 1174 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 PROSER3Q2NL68 480 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 EPHA10Q5JZY3 1008 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 SPECC1Q5M775 1068 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 RNF187Q5TA31 235 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 SAMD5Q5TGI4 173 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 AP1ARQ63HQ0 302 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 HAUS3Q68CZ6 603 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CDCA2Q69YH5 1023 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF746Q6NUN9 644 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 FBXL19Q6PCT2 694 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 FIGNL1Q6PIW4 674 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 RUFY4Q6ZNE9 571 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 SV2BQ7L1I2 683 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CACNA2D4Q7Z3S7 1137 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 FAM114A1Q8IWE2 563 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 DIS3L2Q8IYB7 885 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 RNF10Q8N5U6 811 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 NGDNQ8NEJ9 315 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 SPATA4Q8NEY3 305 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF507Q8TCN5 953 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 BHMTQ93088 406 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 NKD1Q969G9 470 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 OSBP2Q969R2 916 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ARL8AQ96BM9 186 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CENPTQ96BT3 561 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CYFIP2Q96F07 1278 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF512BQ96KM6 892 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 RNPC3Q96LT9 517 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 FAM210AQ96ND0 272 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 NEUROD6Q96NK8 337 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 TCF12Q99081 682 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 TTYH3Q9C0H2 523 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CNOT10Q9H9A5 744 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 TMBIM4Q9HC24 238 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 PLCB1Q9NQ66 1216 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ZFATQ9P243 1243 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 SWAP70Q9UH65 585 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 GPN3Q9UHW5 284 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 TPX2Q9ULW0 747 aaKnown RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 CTNND2Q9UQB3 1225 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ALS2Q96Q42 1657 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ATP8B3O60423 1300 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 ABCB11O95342 1321 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 KIF13BQ9NQT8 1826 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 PLCH1Q4KWH8 1693 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 AKAP11Q9UKA4 1901 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 GOLGA6L10A0A0M3HER8 536 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TTC26A0AVF1 554 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 GOLGA6L10A6NI86 522 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TRIM75PA6NK02 468 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 PDE2AO00408 941 aaPredicted RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TRAPPC3O43617 180 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 RANBP6O60518 1105 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 LUC7L3O95232 432 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 ANXA1P04083 346 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 XBP1P17861 261 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 PRPHP41219 470 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF157P51786 506 aaPredicted RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 PLAURQ03405 335 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 ITIH4Q14624 930 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 RBBP5Q15291 538 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 SPA17Q15506 151 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 SPRED3Q2MJR0 410 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 COBLL1Q53SF7 1204 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 HSP90AA4PQ58FG1 418 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CMPK2Q5EBM0 449 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 COL13A1Q5TAT6 717 aaPredicted RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC181Q5TID7 509 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TTBK2Q6IQ55 1244 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 WDR59Q6PJI9 974 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC81Q6ZN84 652 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CHST3Q7LGC8 479 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 ATG9AQ7Z3C6 839 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CCNJLQ8IV13 435 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 GSPT2Q8IYD1 628 aaKnown RBP6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CACNA2D3Q8IZS8 1091 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 NLGN1Q8N2Q7 840 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TMTC2Q8N394 836 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 KCNH5Q8NCM2 988 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 PHC3Q8NDX5 983 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms