RNA–Protein interactions for RNA: ENST00000560263.1

SEMA4B-216, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-216ENST00000560263 CSRNP2Q9H175 543 aa17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 BHMT2Q9H2M3 363 aa17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 ATP6V0A4Q9HBG4 840 aa17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 PADI3Q9ULW8 664 aa17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 SRPRBQ9Y5M8 271 aaKnown RBP17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 MICAL3Q7RTP6 2002 aa17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 PTPRSQ13332 1948 aa17.33■□□□□ 0.36
SEMA4B-216ENST00000560263 LAMA3Q16787 3333 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 A0A087WZ62 844 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 RPS6KA5O75582 802 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 UBA7P41226 1012 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 KCNJ6P48051 423 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 FXR1P51114 621 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 DNM1Q05193 864 aaKnown RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 NFX1Q12986 1120 aaKnown RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 PAK2Q13177 524 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 GRB10Q13322 594 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 HYIQ5T013 277 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 TMCO2Q7Z6W1 182 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 PRPF31Q8WWY3 499 aaKnown RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 PSPC1Q8WXF1 523 aaKnown RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 APBB2Q92870 758 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 CHAMP1Q96JM3 812 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 FDXACB1Q9BRP7 624 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 COL4A3BPQ9Y5P4 624 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 SQORQ9Y6N5 450 aa17.32■□□□□ 0.36
SEMA4B-216ENST00000560263 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 GAS2O43903 313 aaKnown RBP17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 CSDE1O75534 798 aaKnown RBP17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 FGFR4P22455 802 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 RABGGTBP53611 331 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 PADI6Q6TGC4 694 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 FAM228AQ86W67 206 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 TCP11Q8WWU5 503 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 EPSTI1Q96J88 318 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 ERVK-5Q9HDB9 667 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 GPRC5CQ9NQ84 441 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 ST3GAL5Q9UNP4 418 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 DNM3Q9UQ16 869 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 GBF1Q92538 1859 aa17.31■□□□□ 0.36
SEMA4B-216ENST00000560263 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 SPTLC2O15270 562 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 EFCAB14O75071 495 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 EYA4O95677 639 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 DARSP14868 501 aaKnown RBP17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 EIF4BP23588 611 aaKnown RBP17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 PBX2P40425 430 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 LAMTOR4Q0VGL1 99 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 TMEM119Q4V9L6 283 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 KRI1Q8N9T8 703 aaKnown RBP17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 ASAP3Q8TDY4 903 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 SLC9A7Q96T83 725 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 NT5C3AQ9H0P0 336 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 POLR3FQ9H1D9 316 aaPredicted RBP17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 TMX1Q9H3N1 280 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 POLD4Q9HCU8 107 aa17.3■□□□□ 0.36
SEMA4B-216ENST00000560263 GPR182O15218 404 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 YEATS4O95619 227 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 CYP11B2P19099 503 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 ARL2P36404 184 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 SMAD3P84022 425 aaKnown RBP17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 CDC42EP1Q00587 391 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 FAM102BQ5T8I3 360 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 FAM117BQ6P1L5 589 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 ZNF410Q86VK4 478 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 MYOCDQ8IZQ8 938 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 LINC01599Q8WXQ3 324 aa17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 GCOM2Q9BZD3 368 aaPredicted RBP17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
SEMA4B-216ENST00000560263 ENPP3O14638 875 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 MGEA5O60502 916 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 PPP6R2O75170 966 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 AMHP03971 560 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 MYOGP15173 224 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 PLCG1P19174 1290 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 GLRA2P23416 452 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 HERC6Q8IVU3 1022 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 PHOSPHO2Q8TCD6 241 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 IFT122Q9HBG6 1241 aa17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 LAMA2P24043 3122 aaKnown RBP17.28■□□□□ 0.36
SEMA4B-216ENST00000560263 ASAP2O43150 1006 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms