RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 NT5C1B-RDH14C9J2C7 533 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 PLEKHA8P1O95397 391 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 C22orf31O95567 290 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 CCNE2O96020 404 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 ATP4AP20648 1035 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 METAP2P50579 478 aaKnown RBP eCLIP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 ZNF484Q5JVG2 852 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 ABHD15Q6UXT9 468 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 OTOP3Q7RTS5 596 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 CCDC60Q8IWA6 550 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 ZNF654Q8IZM8 581 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 CMTR1Q8N1G2 835 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 CTCFLQ8NI51 663 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 ACSF2Q96CM8 615 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 AGO4Q9HCK5 861 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 DLL3Q9NYJ7 618 aa14.6□□□□□ -0.07
RABGGTA-213ENST00000560127 hCG_1642624A0A1W2PR95 340 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 BACH1O14867 736 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 NARSO43776 548 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 KIF5BP33176 963 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 BCAR1P56945 870 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 B4GALNT3Q6L9W6 998 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 GPR149Q86SP6 731 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 ZNF598Q86UK7 904 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 RNF169Q8NCN4 708 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 HELQQ8TDG4 1101 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 RIN2Q8WYP3 895 aaPredicted RBP14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 TMEM169Q96HH4 297 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 IRAK3Q9Y616 596 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 BAHCC1Q9P281 2608 aa14.59□□□□□ -0.07
RABGGTA-213ENST00000560127 KRBA1A5PL33 1030 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 E7EWF7 191 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 DDAH1O94760 285 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 CTSAP10619 480 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 ZSCAN20P17040 1043 aaPredicted RBP14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 BMS1Q14692 1282 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 CEP55Q53EZ4 464 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 FAM160B1Q5W0V3 765 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 PDXDC2PQ6P474 469 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 CCDC149Q6ZUS6 474 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 CABP7Q86V35 215 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 DCLK2Q8N568 766 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 METTL13Q8N6R0 699 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 NCOA7Q8NI08 942 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 LZTS2Q9BRK4 669 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 ADAMTS10Q9H324 1103 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 LY9Q9HBG7 655 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 ZNF302Q9NR11 478 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 MYH15Q9Y2K3 1946 aa14.58□□□□□ -0.08
RABGGTA-213ENST00000560127 A0A0U1RQF3 1178 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 DDX39AO00148 427 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 MEIS1O00470 390 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 POLGP54098 1239 aaPredicted RBP14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 NLRP11P59045 1033 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 PTH1RQ03431 593 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 GIT2Q14161 759 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 SMC5Q8IY18 1101 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 MB21D2Q8IYB1 491 aaPredicted RBP14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 TMEM87AQ8NBN3 555 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 EXOC6Q8TAG9 804 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 PGBD1Q96JS3 809 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 HINFPQ9BQA5 517 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 SFXN1Q9H9B4 322 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 IGSF9Q9P2J2 1179 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 PATJQ8NI35 1801 aa14.57□□□□□ -0.08
RABGGTA-213ENST00000560127 STK25O00506 426 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 N4BP1O75113 896 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 CFHP08603 1231 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 GNAQP50148 359 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 CLCN3P51790 818 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 LETM2Q2VYF4 491 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 SWSAP1Q6NVH7 229 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 DDX53Q86TM3 631 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 CHD1LQ86WJ1 897 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 LINC01465Q8N7H1 131 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 BCL7CQ8WUZ0 217 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 RSAD2Q8WXG1 361 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 RUBCNQ92622 972 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 IGSF21Q96ID5 467 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 VN1R3Q9BXE9 311 aa14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 MRPL9Q9BYD2 267 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-213ENST00000560127 ATRXP46100 2492 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 DHX15O43143 795 aaKnown RBP14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 ZC3H11AO75152 810 aaKnown RBP eCLIP14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 SP9P0CG40 484 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 RXRAP19793 462 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 EIF4BP23588 611 aaKnown RBP14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 PTPN14Q15678 1187 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 RSPO4Q2I0M5 234 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 PPFIBP1Q86W92 1011 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 BBXQ8WY36 941 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 ZNF668Q96K58 619 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 TBC1D17Q9HA65 648 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms