RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 SPATA31C1P0DKV0 1188 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 EMC2Q15006 297 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 IL17AQ16552 155 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 POTEGQ6S5H5 508 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 CATSPER3Q86XQ3 398 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 ADAM2Q99965 735 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 FTHL17Q9BXU8 183 aa16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-211ENST00000559850 ATG2AQ2TAZ0 1938 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 PP2D1A8MPX8 630 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 GPR182O15218 404 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 DARSP14868 501 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 EIF4BP23588 611 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 DNM2P50570 870 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 PAN2Q504Q3 1202 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 FERMT3Q86UX7 667 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 SLC7A3Q8WY07 619 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 COL6A3P12111 3177 aa16.57■□□□□ 0.24
RABGGTA-211ENST00000559850 LYPLA2O95372 231 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 SRGAP2CP0DJJ0 459 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 RFC5P40937 340 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 ERVK-21P61565 698 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 GRB10Q13322 594 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 DSC3Q14574 896 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 ECM1Q16610 540 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 TGS1Q96RS0 853 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 MTRQ99707 1265 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 XPNPEP1Q9NQW7 623 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 RGS18Q9NS28 235 aa16.56■□□□□ 0.24
RABGGTA-211ENST00000559850 ADGRA3Q8IWK6 1321 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 K7ELQ4 463 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 LPXNO60711 386 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 DGKIO75912 1065 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 RARRES1P49788 294 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 MAEAQ7L5Y9 396 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 NPAS4Q8IUM7 802 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 CRIPAKQ8N1N5 446 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 CCDC43Q96MW1 224 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 JPH2Q9BR39 696 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 POLR3CQ9BUI4 534 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 GCOM2Q9BZD3 368 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 RC3H2Q9HBD1 1191 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 TUFT1Q9NNX1 390 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 PRDM6Q9NQX0 595 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 LRWD1Q9UFC0 647 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 LRFN2Q9ULH4 789 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
RABGGTA-211ENST00000559850 C9IYK1 514 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 CDC25AP30304 524 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 SARSP49591 514 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 LAMTOR4Q0VGL1 99 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 BTG3Q14201 252 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 RILPL1Q5EBL4 403 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 ODR4Q5SWX8 454 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 FIBCD1Q8N539 461 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 ERMNQ8TAM6 284 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 PSPC1Q8WXF1 523 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 ZNF689Q96CS4 500 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
RABGGTA-211ENST00000559850 EYSQ5T1H1 3165 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 FGFR1P11362 822 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 EPC2Q52LR7 807 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 FAM102BQ5T8I3 360 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 SLC24A5Q71RS6 500 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 ZNF410Q86VK4 478 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 TMEM192Q8IY95 271 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 RNF169Q8NCN4 708 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 FBXO22Q8NEZ5 403 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 ASAP3Q8TDY4 903 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 MINDY3Q9H8M7 445 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 IFT122Q9HBG6 1241 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 HCSTQ9UBK5 93 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 PPME1Q9Y570 386 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 PCDHB7Q9Y5E2 793 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 MTCH2Q9Y6C9 303 aa16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 MRPL42Q9Y6G3 142 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-211ENST00000559850 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.24
RABGGTA-211ENST00000559850 TRANK1O15050 2925 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms