RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TMEM117Q9H0C3 514 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 TYW1Q9NV66 732 aaKnown RBP16.82■□□□□ 0.28
LRRC28-213ENST00000559399 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 NEFLP07196 543 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
LRRC28-213ENST00000559399 NRIP1P48552 1158 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 MTERF2Q49AM1 385 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 XKR3Q5GH77 459 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 B3GNT9Q6UX72 402 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 THNSL1Q8IYQ7 743 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 ABI1Q8IZP0 508 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 COLGALT1Q8NBJ5 622 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 ETNPPLQ8TBG4 499 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 MICAL1Q8TDZ2 1067 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 NLRP7Q8WX94 980 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 ZNF668Q96K58 619 aaPredicted RBP16.81■□□□□ 0.28
LRRC28-213ENST00000559399 NIFKQ9BYG3 293 aaKnown RBP16.81■□□□□ 0.28
LRRC28-213ENST00000559399 TLR9Q9NR96 1032 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 DDX25Q9UHL0 483 aaKnown RBP16.81■□□□□ 0.28
LRRC28-213ENST00000559399 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
LRRC28-213ENST00000559399 DCXO43602 365 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 PLA2G5P39877 138 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 SCRN1Q12765 414 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 INF2Q27J81 1249 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 RBM23Q86U06 439 aaKnown RBP16.8■□□□□ 0.28
LRRC28-213ENST00000559399 ECHDC2Q86YB7 292 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 CWH43Q9H720 699 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 TLE6Q9H808 572 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
LRRC28-213ENST00000559399 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 BRWD1Q9NSI6 2320 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 CCDC194A0A1B0GVG4 234 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 TMEM150BA6NC51 233 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 PRR33A8MZF0 331 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 XBP1P17861 261 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 CDC42EP1Q00587 391 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 DRP2Q13474 957 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 LETM2Q2VYF4 491 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 PDE12Q6L8Q7 609 aaKnown RBP16.79■□□□□ 0.28
LRRC28-213ENST00000559399 RNF169Q8NCN4 708 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 FAM122AQ96E09 287 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 CASD1Q96PB1 797 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 GCOM2Q9BZD3 368 aaPredicted RBP16.79■□□□□ 0.28
LRRC28-213ENST00000559399 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
LRRC28-213ENST00000559399 RNF19AQ9NV58 838 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 CLEC1BQ9P126 229 aa16.79■□□□□ 0.28
LRRC28-213ENST00000559399 ARIH1Q9Y4X5 557 aaPredicted RBP16.79■□□□□ 0.28
LRRC28-213ENST00000559399 A0A0U1RQF3 1178 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 SLC37A4O43826 429 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 STBD1O95210 358 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 EYA4O95677 639 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 GCFC2P16383 781 aaKnown RBP16.78■□□□□ 0.28
LRRC28-213ENST00000559399 FGFR4P22455 802 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 DNM2P50570 870 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 PSMC5P62195 406 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 COASYQ13057 564 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 NEK8Q86SG6 692 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 SMRP1Q8NCR6 262 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 CDCA3Q99618 268 aaPredicted RBP16.78■□□□□ 0.28
LRRC28-213ENST00000559399 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 DACT1Q9NYF0 836 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 TPCN1Q9ULQ1 816 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 BARX2Q9UMQ3 279 aaPredicted RBP16.78■□□□□ 0.28
LRRC28-213ENST00000559399 LZTS1Q9Y250 596 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
LRRC28-213ENST00000559399 IGKV6-21A0A0C4DH24 114 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 DDX11L8A8MPP1 907 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 FSCN2O14926 492 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PER2O15055 1255 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PFKFB2O60825 505 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 GLP2RO95838 553 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PPM1AP35813 382 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 ERVFC1P60507 584 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PLCB3Q01970 1234 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PPP2R5CQ13362 524 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PPP4R3AQ6IN85 833 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 LRRC55Q6ZSA7 311 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
LRRC28-213ENST00000559399 FAM20AQ96MK3 541 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 ZNF558Q96NG5 402 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 CEP89Q96ST8 783 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 JPH2Q9BR39 696 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-213ENST00000559399 KCNMB3Q9NPA1 279 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-213ENST00000559399 PUF60Q9UHX1 559 aaKnown RBP16.77■□□□□ 0.28
LRRC28-213ENST00000559399 VAV3Q9UKW4 847 aa16.77■□□□□ 0.28
LRRC28-213ENST00000559399 DKC1O60832 514 aaKnown RBP eCLIP16.76■□□□□ 0.27
LRRC28-213ENST00000559399 MAFO75444 373 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-213ENST00000559399 CSDE1O75534 798 aaKnown RBP16.76■□□□□ 0.27
LRRC28-213ENST00000559399 EOMESO95936 686 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 ANAPC15P60006 121 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 DUSP6Q16828 381 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms