RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TTYH1Q9H313 450 aaPredicted RBP20.86■□□□□ 0.93
CASC4-209ENST00000559222 ZSCAN16Q9H4T2 348 aaPredicted RBP20.86■□□□□ 0.93
CASC4-209ENST00000559222 GPRC5CQ9NQ84 441 aa20.86■□□□□ 0.93
CASC4-209ENST00000559222 ZDHHC9Q9Y397 364 aa20.86■□□□□ 0.93
CASC4-209ENST00000559222 A0A087WZ62 844 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 PAK2Q13177 524 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 GRB10Q13322 594 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 ZRSR1Q15695 479 aaKnown RBP20.85■□□□□ 0.93
CASC4-209ENST00000559222 USP49Q70CQ1 688 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 MAEAQ7L5Y9 396 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 SPRED2Q7Z698 418 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 MYOCDQ8IZQ8 938 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 ASAP3Q8TDY4 903 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 NLRP7Q8WX94 980 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 NLRP4Q96MN2 994 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 FAM161BQ96MY7 647 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 SLC9A7Q96T83 725 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 MTRQ99707 1265 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 FDXACB1Q9BRP7 624 aaPredicted RBP20.85■□□□□ 0.93
CASC4-209ENST00000559222 POLD4Q9HCU8 107 aa20.85■□□□□ 0.93
CASC4-209ENST00000559222 TFIP11Q9UBB9 837 aaKnown RBP20.85■□□□□ 0.93
CASC4-209ENST00000559222 FBXO2Q9UK22 296 aaPredicted RBP20.85■□□□□ 0.93
CASC4-209ENST00000559222 DBR1Q9UK59 544 aaKnown RBP20.85■□□□□ 0.93
CASC4-209ENST00000559222 LCHNA4D1U4 455 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 RPS6KA5O75582 802 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 NFX1Q12986 1120 aaKnown RBP20.84■□□□□ 0.93
CASC4-209ENST00000559222 SPECC1Q5M775 1068 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 PRPF31Q8WWY3 499 aaKnown RBP20.84■□□□□ 0.93
CASC4-209ENST00000559222 APBB2Q92870 758 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 SCLT1Q96NL6 688 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 CLIC6Q96NY7 704 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 NACC1Q96RE7 527 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 RAB34Q9BZG1 259 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 ATP6V0A4Q9HBG4 840 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 ST3GAL5Q9UNP4 418 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 PPME1Q9Y570 386 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 COL4A3BPQ9Y5P4 624 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 SQORQ9Y6N5 450 aa20.84■□□□□ 0.93
CASC4-209ENST00000559222 ENPP3O14638 875 aa20.83■□□□□ 0.93
CASC4-209ENST00000559222 DARSP14868 501 aaKnown RBP20.83■□□□□ 0.93
CASC4-209ENST00000559222 KRT79Q5XKE5 535 aa20.83■□□□□ 0.93
CASC4-209ENST00000559222 CCDC43Q96MW1 224 aaKnown RBP20.83■□□□□ 0.93
CASC4-209ENST00000559222 CSRNP2Q9H175 543 aa20.83■□□□□ 0.93
CASC4-209ENST00000559222 BHMT2Q9H2M3 363 aa20.83■□□□□ 0.93
CASC4-209ENST00000559222 TTC3P53804 2025 aa20.83■□□□□ 0.92
CASC4-209ENST00000559222 DGAT1O75907 488 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 BMP15O95972 392 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 XRCC6P12956 609 aaKnown RBP eCLIP20.82■□□□□ 0.92
CASC4-209ENST00000559222 NASPP49321 788 aaPredicted RBP20.82■□□□□ 0.92
CASC4-209ENST00000559222 DNM2P50570 870 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 LAMTOR4Q0VGL1 99 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 HYIQ5T013 277 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 PADI6Q6TGC4 694 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 CABP7Q86V35 215 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 USP38Q8NB14 1042 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 PSPC1Q8WXF1 523 aaKnown RBP20.82■□□□□ 0.92
CASC4-209ENST00000559222 TIFAQ96CG3 184 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 JPH2Q9BR39 696 aaPredicted RBP20.82■□□□□ 0.92
CASC4-209ENST00000559222 POLR3FQ9H1D9 316 aaPredicted RBP20.82■□□□□ 0.92
CASC4-209ENST00000559222 MINDY3Q9H8M7 445 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 IFT122Q9HBG6 1241 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 DAXXQ9UER7 740 aaPredicted RBP20.82■□□□□ 0.92
CASC4-209ENST00000559222 KIAA1671Q9BY89 1806 aa20.82■□□□□ 0.92
CASC4-209ENST00000559222 COL4A4P53420 1690 aaPredicted RBP20.82■□□□□ 0.92
CASC4-209ENST00000559222 CHD9Q3L8U1 2897 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 ARHGEF35A5YM69 484 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 EFCAB14O75071 495 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 UPP2O95045 317 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 AMHP03971 560 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 CA3P07451 260 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 SRGAP2CP0DJJ0 459 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 IBSPP21815 317 aaPredicted RBP20.81■□□□□ 0.92
CASC4-209ENST00000559222 MUTP22033 750 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 GLRA2P23416 452 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 EIF4BP23588 611 aaKnown RBP20.81■□□□□ 0.92
CASC4-209ENST00000559222 ARL2P36404 184 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 CAPSQ13938 189 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 DSC3Q14574 896 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 TMEM119Q4V9L6 283 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 PHOSPHO2Q8TCD6 241 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 BSNDQ8WZ55 320 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 EPSTI1Q96J88 318 aa20.81■□□□□ 0.92
CASC4-209ENST00000559222 NLRC5Q86WI3 1866 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 GJB5O95377 273 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 BRD1O95696 1058 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 SLC39A14Q15043 492 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 KARSQ15046 597 aaKnown RBP20.8■□□□□ 0.92
CASC4-209ENST00000559222 DEFB123Q8N688 67 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 LINC00301Q8NCQ3 95 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 RUSC1Q9BVN2 902 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 TSPYL2Q9H2G4 693 aaPredicted RBP20.8■□□□□ 0.92
CASC4-209ENST00000559222 PCDHA11Q9Y5I1 949 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 TCHHQ07283 1943 aa20.8■□□□□ 0.92
CASC4-209ENST00000559222 TLL1O43897 1013 aa20.79■□□□□ 0.92
CASC4-209ENST00000559222 GAS2O43903 313 aaKnown RBP20.79■□□□□ 0.92
CASC4-209ENST00000559222 EYA4O95677 639 aa20.79■□□□□ 0.92
CASC4-209ENST00000559222 LONP1P36776 959 aaKnown RBP20.79■□□□□ 0.92
CASC4-209ENST00000559222 GATMP50440 423 aa20.79■□□□□ 0.92
CASC4-209ENST00000559222 BECN1Q14457 450 aa20.79■□□□□ 0.92
CASC4-209ENST00000559222 ZNF410Q86VK4 478 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms