RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ARHGAP20Q9P2F6 1191 aa14.34□□□□□ -0.11
CASC4-208ENST00000559151 IRS2Q9Y4H2 1338 aa14.34□□□□□ -0.11
CASC4-208ENST00000559151 ZNF503-AS2A6NEH8 195 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 IL18BPO95998 194 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
CASC4-208ENST00000559151 CYP2C8P10632 490 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 ATF2P15336 505 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 APEX1P27695 318 aaKnown RBP14.33□□□□□ -0.12
CASC4-208ENST00000559151 IL13RA1P78552 427 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 KIF23Q02241 960 aaPredicted RBP14.33□□□□□ -0.12
CASC4-208ENST00000559151 STK32CQ86UX6 486 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 LDHDQ86WU2 507 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 TMEM209Q96SK2 561 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 TACO1Q9BSH4 297 aaKnown RBP14.33□□□□□ -0.12
CASC4-208ENST00000559151 PITHD1Q9GZP4 211 aaPredicted RBP14.33□□□□□ -0.12
CASC4-208ENST00000559151 ZFP64Q9NPA5 681 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 SERPINB13Q9UIV8 391 aa14.33□□□□□ -0.12
CASC4-208ENST00000559151 OPHN1O60890 802 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 SPIDRQ14159 915 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 OR14C36Q8NHC7 312 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 FAM168AQ92567 244 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 ZSWIM3Q96MP5 696 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 NMRK2Q9NPI5 230 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 SIRT5Q9NXA8 310 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 ZFP69BQ9UJL9 534 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 CDY2AQ9Y6F7 541 aa14.32□□□□□ -0.12
CASC4-208ENST00000559151 HSPA6P17066 643 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 AKAP5P24588 427 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 HLTFQ14527 1009 aaKnown RBP eCLIP14.31□□□□□ -0.12
CASC4-208ENST00000559151 CATIPQ7Z7H3 387 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 TIFAQ96CG3 184 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 ACE2Q9BYF1 805 aaPredicted RBP14.31□□□□□ -0.12
CASC4-208ENST00000559151 CNTD2Q9H8S5 307 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 ARNT2Q9HBZ2 717 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 FTSJ1Q9UET6 329 aa14.31□□□□□ -0.12
CASC4-208ENST00000559151 CDR1P51861 262 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 ZNF267Q14586 743 aaPredicted RBP14.3□□□□□ -0.12
CASC4-208ENST00000559151 TARBP2Q15633 366 aaKnown RBP14.3□□□□□ -0.12
CASC4-208ENST00000559151 KANK2Q63ZY3 851 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 DIRC2Q96SL1 478 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 NOL10Q9BSC4 688 aaKnown RBP14.3□□□□□ -0.12
CASC4-208ENST00000559151 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 MBD1Q9UIS9 605 aaPredicted RBP14.3□□□□□ -0.12
CASC4-208ENST00000559151 PCDHB6Q9Y5E3 794 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 PCDHA5Q9Y5H7 936 aa14.3□□□□□ -0.12
CASC4-208ENST00000559151 MYOCOSA0A1B0GUC4 107 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 AP1G1O43747 822 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 ITGA1P56199 1179 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 STILQ15468 1287 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 UAP1L1Q3KQV9 507 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 ARHGAP29Q52LW3 1261 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 B3GNT9Q6UX72 402 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 THEMISQ8N1K5 641 aaPredicted RBP14.29□□□□□ -0.12
CASC4-208ENST00000559151 CDYL2Q8N8U2 506 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 GAB3Q8WWW8 586 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 KCNK12Q9HB15 430 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
CASC4-208ENST00000559151 DDX20Q9UHI6 824 aaKnown RBP14.29□□□□□ -0.12
CASC4-208ENST00000559151 EVLQ9UI08 416 aaPredicted RBP14.29□□□□□ -0.12
CASC4-208ENST00000559151 A0A0A6YYJ9 748 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 PEX14O75381 377 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 MYL1P05976 194 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 CD83Q01151 205 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 ADAM9Q13443 819 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 KSR2Q6VAB6 950 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 B3GNT8Q7Z7M8 397 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 STPG3Q8N7X2 389 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 RUNDC1Q96C34 613 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 GORASP1Q9BQQ3 440 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 GTPBP4Q9BZE4 634 aaKnown RBP14.28□□□□□ -0.12
CASC4-208ENST00000559151 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
CASC4-208ENST00000559151 RCAN3Q9UKA8 241 aa14.28□□□□□ -0.12
CASC4-208ENST00000559151 ERC2O15083 957 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 OFD1O75665 1012 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 GRM3Q14832 879 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 RTP5Q14D33 572 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 GAREM2Q75VX8 874 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 COA7Q96BR5 231 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 MCOLN1Q9GZU1 580 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 KCMF1Q9P0J7 381 aa14.27□□□□□ -0.13
CASC4-208ENST00000559151 POU2F2P09086 479 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 PFKLP17858 780 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 ITGB5P18084 799 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 FXR1P51114 621 aaKnown RBP eCLIP14.26□□□□□ -0.13
CASC4-208ENST00000559151 LILRA6Q6PI73 481 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 OR5AN1Q8NGI8 311 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 SLC35G2Q8TBE7 412 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 TAAR9Q96RI9 348 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 KCND1Q9NSA2 647 aa14.26□□□□□ -0.13
CASC4-208ENST00000559151 PEX10O60683 326 aa14.25□□□□□ -0.13
CASC4-208ENST00000559151 GBX1Q14549 363 aa14.25□□□□□ -0.13
CASC4-208ENST00000559151 ANO4Q32M45 955 aa14.25□□□□□ -0.13
CASC4-208ENST00000559151 PRR23BQ6ZRT6 265 aa14.25□□□□□ -0.13
CASC4-208ENST00000559151 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
CASC4-208ENST00000559151 EPB41L4BQ9H329 900 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms