RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 H3BQV1 296 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 TLL1O43897 1013 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 C22orf31O95567 290 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 NFX1Q12986 1120 aaKnown RBP10.82□□□□□ -0.68
SPG11-214ENST00000558989 ELOAQ14241 798 aaKnown RBP10.82□□□□□ -0.68
SPG11-214ENST00000558989 RAB30Q15771 203 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 KIZQ2M2Z5 673 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 IER5Q5VY09 327 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 HERC6Q8IVU3 1022 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 TPH2Q8IWU9 490 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 DYDC2Q96IM9 177 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 FAM167AQ96KS9 214 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 FAM20AQ96MK3 541 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 SLC9A7Q96T83 725 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 CDX2Q99626 313 aaPredicted RBP10.82□□□□□ -0.68
SPG11-214ENST00000558989 AGO3Q9H9G7 860 aaKnown RBP10.82□□□□□ -0.68
SPG11-214ENST00000558989 KLHL42Q9P2K6 505 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 MTUS1Q9ULD2 1270 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 COL1A2P08123 1366 aa10.82□□□□□ -0.68
SPG11-214ENST00000558989 SMIM35A0A1B0GVV1 85 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 LCHNA4D1U4 455 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 POTEMA6NI47 508 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 RFXAPO00287 272 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 ZBTB39O15060 712 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 CAND2O75155 1236 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 BAIAP3O94812 1187 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 ARHGEF15O94989 841 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 NPEPPSP55786 919 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 TBC1D8BQ0IIM8 1120 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 PPP2R5CQ13362 524 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 FAM26DQ5JW98 314 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 FBXO47Q5MNV8 452 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 NOSTRINQ8IVI9 506 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 PPM1EQ8WY54 764 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 OSMRQ99650 979 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 CELF4Q9BZC1 486 aaKnown RBP10.81□□□□□ -0.68
SPG11-214ENST00000558989 ALG2Q9H553 416 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 TTC12Q9H892 705 aaPredicted RBP10.81□□□□□ -0.68
SPG11-214ENST00000558989 WRAP73Q9P2S5 460 aaPredicted RBP10.81□□□□□ -0.68
SPG11-214ENST00000558989 PCDHA12Q9UN75 941 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 ABHD14A-ACY1A0A1B0GW23 586 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 AMHP03971 560 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 MCM2P49736 904 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 TTC3P53804 2025 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 PSMC5P62195 406 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 DRP2Q13474 957 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 B3GNT9Q6UX72 402 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 SLFN12Q8IYM2 578 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 UCN2Q96RP3 112 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 LXNQ9BS40 222 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 FOXP1Q9H334 677 aaPredicted RBP10.81□□□□□ -0.68
SPG11-214ENST00000558989 CEP131Q9UPN4 1083 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 PCDHA11Q9Y5I1 949 aa10.81□□□□□ -0.68
SPG11-214ENST00000558989 PRRC2BQ5JSZ5 2229 aaKnown RBP10.81□□□□□ -0.68
SPG11-214ENST00000558989 hCG_2014768A0A024R1R8 64 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 HMGB1P1B2RPK0 211 aaPredicted RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 TBX3O15119 743 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 CSDE1O75534 798 aaKnown RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 FOSL2P15408 326 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 IGFBP4P22692 258 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 TECP42680 631 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 QARSP47897 775 aaKnown RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 NLRP11P59045 1033 aaKnown RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 PAK2Q13177 524 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 EPHA7Q15375 998 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 XKR3Q5GH77 459 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 TSHZ1Q6ZSZ6 1077 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 ANO5Q75V66 913 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 TMEM40Q8WWA1 233 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 ARNTL2Q8WYA1 636 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 MAP7D2Q96T17 732 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 PADI3Q9ULW8 664 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 NOL7Q9UMY1 257 aaKnown RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 NOC2LQ9Y3T9 749 aaKnown RBP10.8□□□□□ -0.68
SPG11-214ENST00000558989 KIF3AQ9Y496 699 aa10.8□□□□□ -0.68
SPG11-214ENST00000558989 RPS6KA5O75582 802 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 STBD1O95210 358 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 P4HBP07237 508 aaKnown RBP10.79□□□□□ -0.68
SPG11-214ENST00000558989 FGFR4P22455 802 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 SPIRE1Q08AE8 756 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 PTPROQ16827 1216 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 XKR9Q5GH70 373 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 LARP1BQ659C4 914 aaKnown RBP10.79□□□□□ -0.68
SPG11-214ENST00000558989 SDE2Q6IQ49 451 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 RPAINQ86UA6 219 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 PHOSPHO2Q8TCD6 241 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
SPG11-214ENST00000558989 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.79□□□□□ -0.68
SPG11-214ENST00000558989 PCDHB6Q9Y5E3 794 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 MYO7AQ13402 2215 aa10.79□□□□□ -0.68
SPG11-214ENST00000558989 COL4A4P53420 1690 aaPredicted RBP10.79□□□□□ -0.68
SPG11-214ENST00000558989 VPS37CA5D8V6 355 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms