RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 MASP1P48740 699 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 ADCY2Q08462 1091 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 TBR1Q16650 682 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 KIAA1841Q6NSI8 718 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 KLHDC10Q6PID8 442 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 ZNF610Q8N9Z0 462 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 DNERQ8NFT8 737 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 GFM2Q969S9 779 aaKnown RBP5.27□□□□□ -1.57
VPS13C-207ENST00000558919 PITHD1Q9GZP4 211 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-207ENST00000558919 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 TMX1Q9H3N1 280 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 CAAP1Q9H8G2 361 aa5.27□□□□□ -1.57
VPS13C-207ENST00000558919 PMS2P1A4D2B8 440 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 PATE3B3GLJ2 98 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 ZEB2O60315 1214 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 H2AFYO75367 372 aaKnown RBP5.26□□□□□ -1.57
VPS13C-207ENST00000558919 CR2P20023 1033 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 SOX5P35711 763 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 ANTXR2P58335 489 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 TERF2Q15554 542 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 EGFLAMQ63HQ2 1017 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 ESPNLQ6ZVH7 1005 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 CHST13Q8NET6 341 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 USP7Q93009 1102 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 LRRC37BQ96QE4 947 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 MYL10Q9BUA6 226 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 POFUT1Q9H488 388 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 EMC7Q9NPA0 242 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 PUF60Q9UHX1 559 aaKnown RBP5.26□□□□□ -1.57
VPS13C-207ENST00000558919 DENND2AQ9ULE3 1009 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 OAZ3Q9UMX2 235 aa5.26□□□□□ -1.57
VPS13C-207ENST00000558919 CTDP1Q9Y5B0 961 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-207ENST00000558919 A0A0A6YYJ9 748 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 MATN2O00339 956 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 ADRB1P08588 477 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 ADAM17P78536 824 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 HGFACQ04756 655 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 ATP13A4Q4VNC1 1196 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 TAX1BP1Q86VP1 789 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 GIMAP8Q8ND71 665 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-207ENST00000558919 CHAC2Q8WUX2 184 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 CFHR4Q92496 578 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 NKD2Q969F2 451 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-207ENST00000558919 DYDC2Q96IM9 177 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 ZNF496Q96IT1 587 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-207ENST00000558919 TTC1Q99614 292 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 C1QTNF3Q9BXJ4 246 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 IFT22Q9H7X7 185 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 CD248Q9HCU0 757 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 POLR3BQ9NW08 1133 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-207ENST00000558919 MAGEL2Q9UJ55 1249 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 MSRAQ9UJ68 235 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 FAM184BQ9ULE4 1060 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 SYNPO2Q9UMS6 1093 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 PRKAB1Q9Y478 270 aa5.25□□□□□ -1.57
VPS13C-207ENST00000558919 ELL2O00472 640 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-207ENST00000558919 CDC14BO60729 498 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 OPHN1O60890 802 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 APOL3O95236 402 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 NFKB2Q00653 900 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 ADAM15Q13444 863 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 ICAM4Q14773 271 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 TCTN3Q6NUS6 607 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 UNQ6494/PRO21346Q6UXR6 183 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 FRMD7Q6ZUT3 714 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 KRT26Q7Z3Y9 468 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 SLC5A5Q92911 643 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 SLC7A6OSQ96CW6 309 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-207ENST00000558919 C8orf49Q96NF6 230 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 GNRHR2Q96P88 292 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 C12orf65Q9H3J6 166 aaKnown RBP5.24□□□□□ -1.57
VPS13C-207ENST00000558919 SEMA4AQ9H3S1 761 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 MTG2Q9H4K7 406 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 ST6GALNAC2Q9UJ37 374 aa5.24□□□□□ -1.57
VPS13C-207ENST00000558919 ZFR2Q9UPR6 939 aaKnown RBP5.24□□□□□ -1.57
VPS13C-207ENST00000558919 MYPNQ86TC9 1320 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 BRINP1O60477 761 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 ZNF623O75123 536 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 ULK1O75385 1050 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 VIL1P09327 827 aaKnown RBP5.23□□□□□ -1.57
VPS13C-207ENST00000558919 RPS19P39019 145 aaKnown RBP5.23□□□□□ -1.57
VPS13C-207ENST00000558919 DUSP8Q13202 625 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 DDB1Q16531 1140 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 BROXQ5VW32 411 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 RASSF3Q86WH2 238 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 OR14K1Q8NGZ2 314 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 Q8TCH9 128 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 RABGGTAQ92696 567 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 DVL3Q92997 716 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-207ENST00000558919 FERMT2Q96AC1 680 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 HIST1H2AHQ96KK5 128 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 WDR92Q96MX6 357 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 HIST1H2AJQ99878 128 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 DPYSL5Q9BPU6 564 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 OSBPL6Q9BZF3 934 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 WNT8AQ9H1J5 351 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 SLC6A15Q9H2J7 730 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 NELFAQ9H3P2 528 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 KCNG1Q9UIX4 513 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms