RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PAN2Q504Q3 1202 aaKnown RBP19.1■□□□□ 0.65
LRRC28-210ENST00000558879 DIS3L2Q8IYB7 885 aaKnown RBP19.1■□□□□ 0.65
LRRC28-210ENST00000558879 IL27Q8NEV9 243 aa19.1■□□□□ 0.65
LRRC28-210ENST00000558879 SH2D3AQ9BRG2 576 aa19.1■□□□□ 0.65
LRRC28-210ENST00000558879 NSUN3Q9H649 340 aaKnown RBP19.1■□□□□ 0.65
LRRC28-210ENST00000558879 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
LRRC28-210ENST00000558879 TMEM161AQ9NX61 479 aa19.1■□□□□ 0.65
LRRC28-210ENST00000558879 LRFN2Q9ULH4 789 aa19.1■□□□□ 0.65
LRRC28-210ENST00000558879 BTBD18B2RXH4 712 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 WNT7AO00755 349 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 MAFO75444 373 aaPredicted RBP19.09■□□□□ 0.65
LRRC28-210ENST00000558879 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 TCEAL5Q5H9L2 206 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 PLA2G4FQ68DD2 849 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 SLFN12Q8IYM2 578 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 LIMCH1Q9UPQ0 1083 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 PPME1Q9Y570 386 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 PCDHB7Q9Y5E2 793 aa19.09■□□□□ 0.65
LRRC28-210ENST00000558879 DKC1O60832 514 aaKnown RBP eCLIP19.08■□□□□ 0.64
LRRC28-210ENST00000558879 P4HBP07237 508 aaKnown RBP19.08■□□□□ 0.64
LRRC28-210ENST00000558879 CAMK1Q14012 370 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 EPHA7Q15375 998 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 C4orf19Q8IY42 314 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 ZNF668Q96K58 619 aaPredicted RBP19.08■□□□□ 0.64
LRRC28-210ENST00000558879 LXNQ9BS40 222 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 CYP26B1Q9NR63 512 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 RNF19AQ9NV58 838 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 PLAGL2Q9UPG8 496 aa19.08■□□□□ 0.64
LRRC28-210ENST00000558879 ITGB1P05556 798 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 LEXMQ3ZCV2 418 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 FAM102BQ5T8I3 360 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 ZNF410Q86VK4 478 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 CCDC83Q8IWF9 413 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 NEK9Q8TD19 979 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 NLRP7Q8WX94 980 aa19.07■□□□□ 0.64
LRRC28-210ENST00000558879 NECAB3Q96P71 396 aaPredicted RBP19.07■□□□□ 0.64
LRRC28-210ENST00000558879 JPH2Q9BR39 696 aaPredicted RBP19.07■□□□□ 0.64
LRRC28-210ENST00000558879 LLPHQ9BRT6 129 aaKnown RBP19.07■□□□□ 0.64
LRRC28-210ENST00000558879 DHX33Q9H6R0 707 aaKnown RBP19.07■□□□□ 0.64
LRRC28-210ENST00000558879 A0A087WZ62 844 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 DDX11L8A8MPP1 907 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 FGFR1P11362 822 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 DNAJB1P25685 340 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 RBM25P49756 843 aaKnown RBP19.06■□□□□ 0.64
LRRC28-210ENST00000558879 FOSBP53539 338 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 NPEPPSP55786 919 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 CDC42EP1Q00587 391 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 TRIM29Q14134 588 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 NCAPH2Q6IBW4 605 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 KLHL23Q8NBE8 558 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 PABPC5Q96DU9 382 aaKnown RBP19.06■□□□□ 0.64
LRRC28-210ENST00000558879 FDXACB1Q9BRP7 624 aaPredicted RBP19.06■□□□□ 0.64
LRRC28-210ENST00000558879 ALG13Q9NP73 1137 aaKnown RBP19.06■□□□□ 0.64
LRRC28-210ENST00000558879 HCSTQ9UBK5 93 aa19.06■□□□□ 0.64
LRRC28-210ENST00000558879 TBKBP1A7MCY6 615 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 NEMFO60524 1076 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 BAG4O95429 457 aaKnown RBP19.05■□□□□ 0.64
LRRC28-210ENST00000558879 ATF7P17544 494 aaPredicted RBP19.05■□□□□ 0.64
LRRC28-210ENST00000558879 FGFR4P22455 802 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 KCNA5P22460 613 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 ECHDC2Q86YB7 292 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 ZNF579Q8NAF0 562 aaKnown RBP19.05■□□□□ 0.64
LRRC28-210ENST00000558879 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.05■□□□□ 0.64
LRRC28-210ENST00000558879 SPPL3Q8TCT6 385 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 DYDC2Q96IM9 177 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 SCLT1Q96NL6 688 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 GCOM2Q9BZD3 368 aaPredicted RBP19.05■□□□□ 0.64
LRRC28-210ENST00000558879 CWH43Q9H720 699 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 ATP6V0A4Q9HBG4 840 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 RGL1Q9NZL6 768 aa19.05■□□□□ 0.64
LRRC28-210ENST00000558879 ZSCAN20P17040 1043 aaPredicted RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 IBSPP21815 317 aaPredicted RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 YWHABP31946 246 aaKnown RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 RFC5P40937 340 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 DNM2P50570 870 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 HYAL1Q12794 435 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 CALCRLQ16602 461 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 CTC1Q2NKJ3 1217 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 ZNF598Q86UK7 904 aaKnown RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 RHPN2Q8IUC4 686 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 CEP170P1Q96L14 293 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 ZSCAN31Q96LW9 406 aaPredicted RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 MTMR9Q96QG7 549 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 TRAIPQ9BWF2 469 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 TMEM117Q9H0C3 514 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 ZSWIM4Q9H7M6 989 aa19.04■□□□□ 0.64
LRRC28-210ENST00000558879 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 SUCLA2Q9P2R7 463 aaPredicted RBP19.04■□□□□ 0.64
LRRC28-210ENST00000558879 MYH11P35749 1972 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 A0A0U1RQF3 1178 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 HOXA2O43364 376 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 GAS2O43903 313 aaKnown RBP19.03■□□□□ 0.64
LRRC28-210ENST00000558879 MARCH6O60337 910 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 CSDE1O75534 798 aaKnown RBP19.03■□□□□ 0.64
LRRC28-210ENST00000558879 LYPLA2O95372 231 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 SFPQP23246 707 aaKnown RBP eCLIP19.03■□□□□ 0.64
LRRC28-210ENST00000558879 HMGN5P82970 282 aaKnown RBP19.03■□□□□ 0.64
LRRC28-210ENST00000558879 CYP4A11Q02928 519 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 COLGALT1Q8NBJ5 622 aa19.03■□□□□ 0.64
LRRC28-210ENST00000558879 POF1BQ8WVV4 589 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms