RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 OSMRQ99650 979 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 MTF2Q9Y483 593 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-206ENST00000558739 SPDYE4A6NLX3 237 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 ITGB5P18084 799 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-206ENST00000558739 CSTF1Q05048 431 aaKnown RBP13.65□□□□□ -0.22
SMAD3-206ENST00000558739 LPAL2Q16609 132 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 PHLDB3Q6NSJ2 640 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 KIAA0319LQ8IZA0 1049 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 EPC1Q9H2F5 836 aa13.65□□□□□ -0.22
SMAD3-206ENST00000558739 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-206ENST00000558739 RPLP2P05387 115 aaKnown RBP13.64□□□□□ -0.23
SMAD3-206ENST00000558739 BCAR1P56945 870 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 DMWDQ09019 674 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 SPEM2Q0P670 501 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 DCLRE1AQ6PJP8 1040 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 IQCA1Q86XH1 822 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 ABI1Q8IZP0 508 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 ELAC1Q9H777 363 aaKnown RBP13.64□□□□□ -0.23
SMAD3-206ENST00000558739 RALGAPA1Q6GYQ0 2036 aa13.64□□□□□ -0.23
SMAD3-206ENST00000558739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 B4GALT3O60512 393 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 CTSAP10619 480 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 PCP11498 1178 aaKnown RBP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 CLCN4P51793 760 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 C20orf194Q5TEA3 1177 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 GPR161Q8N6U8 529 aaKnown RBP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 ZBTB44Q8NCP5 570 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-206ENST00000558739 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 EPS15L1Q9UBC2 864 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 ANGPTL2Q9UKU9 493 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 IRAK3Q9Y616 596 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 CLUHO75153 1309 aa13.63□□□□□ -0.23
SMAD3-206ENST00000558739 PALM3A6NDB9 673 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-206ENST00000558739 SLC30A4O14863 429 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 GPR182O15218 404 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 LAMTOR5O43504 91 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 GDF9O60383 454 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 LILRB5O75023 590 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 RFPL2O75678 378 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 VTNP04004 478 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMAD3-206ENST00000558739 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
SMAD3-206ENST00000558739 MX1P20591 662 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 KLRC1P26715 233 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 NLRX1Q86UT6 975 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 TMEM87AQ8NBN3 555 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 ATRIPQ8WXE1 791 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 RPP25Q9BUL9 199 aaKnown RBP13.62□□□□□ -0.23
SMAD3-206ENST00000558739 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 JPH1Q9HDC5 661 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-206ENST00000558739 ZSWIM5Q9P217 1185 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 SALL3Q9BXA9 1300 aa13.62□□□□□ -0.23
SMAD3-206ENST00000558739 ZBTB42B2RXF5 422 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 MEIS2O14770 477 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 CNPP09543 421 aaKnown RBP13.61□□□□□ -0.23
SMAD3-206ENST00000558739 CD72P21854 359 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 PMLP29590 882 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
SMAD3-206ENST00000558739 HTR4Q13639 388 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 NME8Q8N427 588 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 ZNF668Q96K58 619 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-206ENST00000558739 AZI2Q9H6S1 392 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
SMAD3-206ENST00000558739 MAN1C1Q9NR34 630 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 FBXO4Q9UKT5 387 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
SMAD3-206ENST00000558739 HOXA2O43364 376 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 GPR32O75388 356 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 ALDH7A1P49419 539 aaKnown RBP13.6□□□□□ -0.23
SMAD3-206ENST00000558739 STARD6P59095 220 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 ACTR2P61160 394 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 MTMR1Q13613 665 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 IFIT1BQ5T764 474 aaKnown RBP13.6□□□□□ -0.23
SMAD3-206ENST00000558739 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
SMAD3-206ENST00000558739 ZNF598Q86UK7 904 aaKnown RBP13.6□□□□□ -0.23
SMAD3-206ENST00000558739 SMARCC2Q8TAQ2 1214 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 NETO1Q8TDF5 533 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-206ENST00000558739 NELL1Q92832 810 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
SMAD3-206ENST00000558739 IGSF21Q96ID5 467 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms