RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 EIF3DO15371 548 aaKnown RBP eCLIP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 BIRC5O15392 142 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 CYTH3O43739 400 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 LY75O60449 1722 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 N4BP1O75113 896 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TBCAO75347 108 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 DNAJC8O75937 253 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TMCC1O94876 653 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 GGPS1O95749 300 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SYF2O95926 243 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PYGLP06737 847 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 USP17L8P0C7I0 530 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 MYZAPP0CAP1 466 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PDHBP11177 359 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 XRCC5P13010 732 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 CASP1P29466 404 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 GGCXP38435 758 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PRKCIP41743 596 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 BTDP43251 543 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 CCT8P50990 548 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TUBA4AP68366 448 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 MRPS25P82663 173 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 EHHADHQ08426 723 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 GRB10Q13322 594 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SUZ12Q15022 739 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 FAM83BQ5T0W9 1011 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 MEI1Q5TIA1 1274 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TBC1D9BQ66K14 1250 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 MIS18BP1Q6P0N0 1132 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 USP37Q86T82 979 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 HOOK3Q86VS8 718 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TRIM59Q8IWR1 403 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 LMNTD2Q8IXW0 634 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ARHGAP18Q8N392 663 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PPP1R14CQ8TAE6 165 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 NKX2-3Q8TAU0 364 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TRPC4APQ8TEL6 797 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SLC39A7Q92504 469 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SHISA4Q96DD7 197 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 MAML3Q96JK9 1138 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 CRAMP1Q96RY5 1269 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 RTFDC1Q9BY42 306 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 EIF2AQ9BY44 585 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 COA1Q9GZY4 146 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SEMA6BQ9H3T3 888 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TAF1DQ9H5J8 278 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ZWILCHQ9H900 591 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PSTPIP2Q9H939 334 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ZCCHC17Q9NP64 241 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SLC39A2Q9NP94 309 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 GDF3Q9NR23 364 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ST7Q9NRC1 585 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 FAM207AQ9NSI2 230 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 EMILIN3Q9NT22 766 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 AGPAT5Q9NUQ2 364 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 DNAAF2Q9NVR5 837 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 MTMR4Q9NYA4 1195 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TFCP2L1Q9NZI6 479 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 C6orf203Q9P0P8 240 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ARHGAP20Q9P2F6 1191 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 SUCLA2Q9P2R7 463 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PNMA2Q9UL42 364 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TTC7AQ9ULT0 858 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TRAF3IP3Q9Y228 551 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ITM2BQ9Y287 266 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF510Q9Y2H8 683 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PFASO15067 1338 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 IRS2Q9Y4H2 1338 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 FRMD3A2A2Y4 597 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ANKRD62A6NC57 917 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 USP17L3A6NCW0 530 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 USP17L4A6NCW7 530 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 MYMKA6NI61 221 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 MIF4GDA9UHW6 222 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 NDUFAB1O14561 156 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 GNPATO15228 680 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 NMT2O60551 498 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF189O75820 626 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 RNF8O76064 485 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 AFPP02771 609 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 MMEP08473 750 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 VIMP08670 466 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 H2AFZP0C0S5 128 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 CYP2D6P10635 497 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 C7P10643 843 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 EIF4BP23588 611 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ATP5DP30049 168 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 CDC25AP30304 524 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 STAT1P42224 750 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 PSMC4P43686 418 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 TNNI2P48788 182 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 IRAK1P51617 712 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF132P52740 706 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 HDAC4P56524 1084 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ARPC4P59998 168 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 FKBP1AP62942 108 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 TUBA1BP68363 451 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 PHEXP78562 749 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms