RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 RARAP10276 462 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 GBP1P32455 592 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PDE6CP51160 858 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 NAPAP54920 295 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 COPS2P61201 443 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 DR1Q01658 176 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC63Q05C16 580 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 DGKZQ13574 1117 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SLC29A2Q14542 456 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 DLK2Q6UY11 383 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SAMD7Q7Z3H4 446 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PIGWQ7Z7B1 504 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 NLRP10Q86W26 655 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SULF1Q8IWU6 871 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 LMNTD2Q8IXW0 634 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SLC17A8Q8NDX2 589 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ATXN2LQ8WWM7 1075 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 CENPTQ96BT3 561 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 DCPSQ96C86 337 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 TLCD1Q96CP7 247 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 NAF1Q96HR8 494 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SLITRK6Q9H5Y7 841 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ARHGEF10LQ9HCE6 1279 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 DBR1Q9UK59 544 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PNMA3Q9UL41 463 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 USP15Q9Y4E8 981 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 STXBP3O00186 592 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 PDE8AO60658 829 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 GNAT1P11488 350 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ATP4AP20648 1035 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 PTK2Q05397 1052 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 SEMA3FQ13275 785 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 BLMHQ13867 455 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 SEPT2Q15019 361 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ALKBH5Q6P6C2 394 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 UNC13DQ70J99 1090 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 MYOCDQ8IZQ8 938 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 GPC2Q8N158 579 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 GUF1Q8N442 669 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 GDAP1Q8TB36 358 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 GLG1Q92896 1179 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 AK8Q96MA6 479 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 EDEM3Q9BZQ6 932 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TRIM7Q9C029 511 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 SEPT11Q9NVA2 429 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 DAAM1Q9Y4D1 1078 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 FLT1P17948 1338 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TOGARAM1Q9Y4F4 1720 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 UBR3Q6ZT12 1888 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TULP1O00294 542 aaPredicted RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 LAD1O00515 517 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 IRF6O14896 467 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TRPA1O75762 1119 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 NOL4O94818 638 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 LINGO3P0C6S8 592 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ACTN1P12814 892 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 FGFR4P22455 802 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 PAPOLAP51003 745 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF157P51786 506 aaPredicted RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 RBM5P52756 815 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 FKBP3Q00688 224 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ADCY1Q08828 1119 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF211Q13398 564 aaPredicted RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TCERG1LQ5VWI1 586 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TMED8Q6PL24 325 aaPredicted RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 TAOK1Q7L7X3 1001 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 VPS36Q86VN1 386 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 LARP4BQ92615 738 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 STMN4Q9H169 189 aaPredicted RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 ETNK1Q9HBU6 452 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 VAT1LQ9HCJ6 419 aa5.48□□□□□ -1.53
HMG20A-204ENST00000558288 PAPOLBQ9NRJ5 636 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 CNOT7Q9UIV1 285 aaKnown RBP5.48□□□□□ -1.53
HMG20A-204ENST00000558288 H0Y3Z8 333 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 RASGRF2O14827 1237 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 SNX3O60493 162 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 FLOT1O75955 427 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 H2AFZP0C0S5 128 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 GOLGA8HP0CJ92 632 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 ABCB4P21439 1286 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 MMP13P45452 471 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF131P52739 623 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 PSMD2Q13200 908 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 TNIP1Q15025 636 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 NONOQ15233 471 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMG20A-204ENST00000558288 C6orf118Q5T5N4 469 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC55Q6ZSA7 311 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 H2AFVQ71UI9 128 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 SUPT20HQ8NEM7 779 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 TPCN2Q8NHX9 752 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 U2AF1L4Q8WU68 220 aaKnown RBP5.47□□□□□ -1.53
HMG20A-204ENST00000558288 DDX12PQ92771 950 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 SYN2Q92777 582 aaPredicted RBP5.47□□□□□ -1.53
HMG20A-204ENST00000558288 UIMC1Q96RL1 719 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 PABPC3Q9H361 631 aaKnown RBP5.47□□□□□ -1.53
HMG20A-204ENST00000558288 CPVLQ9H3G5 476 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 RASAL2Q9UJF2 1139 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 ANAPC4Q9UJX5 808 aa5.47□□□□□ -1.53
HMG20A-204ENST00000558288 AMFRQ9UKV5 643 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms