RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SMIM10L2BP0DMW5 78 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 DNM2P50570 870 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 PAK1Q13153 545 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 KCNA10Q16322 511 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
SNX1-203ENST00000558040 IER5Q5VY09 327 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 KLHL10Q6JEL2 608 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 MYOCDQ8IZQ8 938 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 GUF1Q8N442 669 aaKnown RBP18.63■□□□□ 0.57
SNX1-203ENST00000558040 ARRDC4Q8NCT1 418 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 DHTKD1Q96HY7 919 aaPredicted RBP18.63■□□□□ 0.57
SNX1-203ENST00000558040 CBX8Q9HC52 389 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 POLD4Q9HCU8 107 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 H0YCG3 227 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 EIF3DO15371 548 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNX1-203ENST00000558040 CABYRO75952 493 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 GCNT3O95395 438 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 C22orf31O95567 290 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 ASGR1P07306 291 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 GNAT1P11488 350 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 CD44P16070 742 aaKnown RBP18.62■□□□□ 0.57
SNX1-203ENST00000558040 SCP2P22307 547 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 KLRC1P26715 233 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 TMOD1P28289 359 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 ABCD1P33897 745 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 ARL2P36404 184 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 LRRC41Q15345 812 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 LHX8Q68G74 356 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 CXCL17Q6UXB2 119 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 C7orf31Q8N865 590 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 RNF214Q8ND24 703 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 PSPC1Q8WXF1 523 aaKnown RBP18.62■□□□□ 0.57
SNX1-203ENST00000558040 TMEM143Q96AN5 459 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 TSEN34Q9BSV6 310 aaKnown RBP18.62■□□□□ 0.57
SNX1-203ENST00000558040 UNC93B1Q9H1C4 597 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 RBSNQ9H1K0 784 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 SUGCTQ9HAC7 445 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 CTNND2Q9UQB3 1225 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 MAPK8IP1Q9UQF2 711 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 UBE4BO95155 1302 aa18.62■□□□□ 0.57
SNX1-203ENST00000558040 MYH11P35749 1972 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 MOXD2PA6NHM9 499 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 GOLGA6L19H0YKK7 550 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 K7ENM7 598 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 PEX3P56589 373 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 TPM4P67936 248 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 MXD4Q14582 209 aaPredicted RBP18.61■□□□□ 0.57
SNX1-203ENST00000558040 CCSAPQ6IQ19 270 aaPredicted RBP18.61■□□□□ 0.57
SNX1-203ENST00000558040 EFCAB12Q6NXP0 572 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 METTL13Q8N6R0 699 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 NELFBQ8WX92 580 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 KMT5AQ9NQR1 393 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 PAK6Q9NQU5 681 aaPredicted RBP18.61■□□□□ 0.57
SNX1-203ENST00000558040 SETD4Q9NVD3 440 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 RWDD2AQ9UIY3 292 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 PCDHB13Q9Y5F0 798 aa18.61■□□□□ 0.57
SNX1-203ENST00000558040 FSD2A1L4K1 749 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 C17orf102A2RUQ5 167 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 CCDC169A6NNP5 214 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 IKBKBO14920 756 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 CCL5P13501 91 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 NAMPTP43490 491 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 NPTX2P47972 431 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 NCKAP1LP55160 1127 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 SOX10P56693 466 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 MYL5Q02045 173 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 BMT2Q1RMZ1 405 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 EPM2AIP1Q7L775 607 aaPredicted RBP18.6■□□□□ 0.57
SNX1-203ENST00000558040 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 AOPEPQ8N6M6 819 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 LMBR1Q8WVP7 490 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 FIZ1Q96SL8 496 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 RNF208Q9H0X6 261 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 ST6GALNAC4Q9H4F1 302 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 FRMPD3Q5JV73 1810 aa18.6■□□□□ 0.57
SNX1-203ENST00000558040 KBTBD13C9JR72 458 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 ASAP2O43150 1006 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 MYBP10242 640 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 GLRA2P23416 452 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 CCNE1P24864 410 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 NMT1P30419 496 aaKnown RBP18.59■□□□□ 0.57
SNX1-203ENST00000558040 ACLYP53396 1101 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 TFDP1Q14186 410 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 IQCB1Q15051 598 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 NFRKBQ6P4R8 1299 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 LUZP1Q86V48 1076 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 DHX40Q8IX18 779 aaKnown RBP18.59■□□□□ 0.57
SNX1-203ENST00000558040 LRRC71Q8N4P6 559 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 ENOX1Q8TC92 643 aaKnown RBP18.59■□□□□ 0.57
SNX1-203ENST00000558040 SCFD1Q8WVM8 642 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 P2RX5Q93086 422 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 HVCN1Q96D96 273 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 MAP7D2Q96T17 732 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 TSG101Q99816 390 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms