RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 LSM14BQ9BX40 385 aaKnown RBP6.78□□□□□ -1.32
TRPM1-204ENST00000557948 VRTNQ9H8Y1 702 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 IL21Q9HBE4 155 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 DZANK1Q9NVP4 752 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 NYAP2Q9P242 653 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 CCPG1Q9ULG6 757 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 C2orf16Q68DN1 1984 aa6.78□□□□□ -1.32
TRPM1-204ENST00000557948 FNDC1Q4ZHG4 1894 aaPredicted RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 SPTA1P02549 2419 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 GOLGA6L22H0YM25 854 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 TREHO43280 583 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 S1PR4O95977 384 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 BMP3P12645 472 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 PLA2G2AP14555 144 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 BRD2P25440 801 aaKnown RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 CA8P35219 290 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 MAGEA9P43362 315 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 NASPP49321 788 aaPredicted RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 NOVA1P51513 510 aaKnown RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 NRLP54845 237 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 STARD6P59095 220 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 ZNF252P-AS1Q0IIN9 211 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 CCDC6Q16204 474 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 STPG1Q5TH74 334 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 KANK3Q6NY19 840 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 CCDC62Q6P9F0 684 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 SEPT14Q6ZU15 432 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 C16orf86Q6ZW13 317 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 FAM160B2Q86V87 743 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 SLC44A3Q8N4M1 653 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 CHURC1Q8WUH1 139 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 MRPS27Q92552 414 aaKnown RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 GPKOWQ92917 476 aaPredicted RBP eCLIP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 PDLIM2Q96JY6 352 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 DNAJC2Q99543 621 aaKnown RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 SLKQ9H2G2 1235 aaPredicted RBP6.77□□□□□ -1.33
TRPM1-204ENST00000557948 CLIP2Q9UDT6 1046 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 WASF3Q9UPY6 502 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 LZTS1Q9Y250 596 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 LOXHD1Q8IVV2 1947 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 SHROOM3Q8TF72 1996 aa6.77□□□□□ -1.33
TRPM1-204ENST00000557948 PTPRCP08575 1304 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 CYP2D7A0A087X1C5 515 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 KANSL1LA0AUZ9 987 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 CCDC66A2RUB6 948 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 ARHGAP6O43182 974 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 CLASP2O75122 1294 aaKnown RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 TOP3BO95985 862 aaKnown RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 EDNRBP24530 442 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 GBP2P32456 591 aaPredicted RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 DDIT3P35638 169 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 GATMP50440 423 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 ZNF445P59923 1031 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 SNAP25P60880 206 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 SIM2Q14190 667 aaPredicted RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 SMC1AQ14683 1233 aaKnown RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 UBXN2BQ14CS0 331 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 SLFNL1Q499Z3 407 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 FAM26DQ5JW98 314 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 TMC5Q6UXY8 1006 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 RASGRP2Q7LDG7 609 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 ZNF605Q86T29 641 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 COLGALT1Q8NBJ5 622 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 TMEM87AQ8NBN3 555 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 MYRIPQ8NFW9 859 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 PPTC7Q8NI37 304 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 BAP1Q92560 729 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 SNX21Q969T3 373 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 ZNF512BQ96KM6 892 aaPredicted RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 CCDC39Q9UFE4 941 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 ZKSCAN5Q9Y2L8 839 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 FCF1Q9Y324 198 aaKnown RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 R3HCC1Q9Y3T6 440 aaKnown RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 KALRNO60229 2985 aa6.76□□□□□ -1.33
TRPM1-204ENST00000557948 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
TRPM1-204ENST00000557948 ASXL3Q9C0F0 2248 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 FAM170BA6NMN3 283 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 NFIBO00712 420 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 GNAT1P11488 350 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 IBSPP21815 317 aaPredicted RBP6.75□□□□□ -1.33
TRPM1-204ENST00000557948 KRT17Q04695 432 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 LAMC2Q13753 1193 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 NCOA4Q13772 614 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 LPIN1Q14693 890 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 PPP2R5DQ14738 602 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 LETM2Q2VYF4 491 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 C12orf60Q5U649 245 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 SLFN13Q68D06 897 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 SLC30A10Q6XR72 485 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms