RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	KDF1	Q8NAX2	398 aa	Predicted RBP	10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	TMEM40	Q8WWA1	233 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	MYADM	Q96S97	322 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZKSCAN3	Q9BRR0	538 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	CDHR5	Q9HBB8	845 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	SEMA4G	Q9NTN9	838 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	RNF19A	Q9NV58	838 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	SPEG	Q15772	3267 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	CEP295	Q9C0D2	2601 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	DOCK5	Q9H7D0	1870 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	CARNS1	A5YM72	827 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	GDF9	O60383	454 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	PPP1R11	O60927	126 aa	Predicted RBP	10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	FGA	P02671	866 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	CLCN4	P51793	760 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	NRL	P54845	237 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	PRKCQ	Q04759	706 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	PLCB4	Q15147	1175 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	CSRP2	Q16527	193 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	TSSK4	Q6SA08	328 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	DDX53	Q86TM3	631 aa	Known RBP	10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	CMAS	Q8NFW8	434 aa	Predicted RBP	10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	PANK1	Q8TE04	598 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	BBX	Q8WY36	941 aa	Predicted RBP	10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	ESR2	Q92731	530 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	MYL10	Q9BUA6	226 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	DDX23	Q9BUQ8	820 aa	Known RBP	10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	EMILIN2	Q9BXX0	1053 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	AZI2	Q9H6S1	392 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	6e-6	■■□□□ 12.1
PABPN1-208	ENST00000557702	MTF2	Q9Y483	593 aa	Predicted RBP	10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZZEF1	O43149	2961 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	CLUH	O75153	1309 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	FRMPD4	Q14CM0	1322 aa		10.81	□□□□□ -0.68
PABPN1-208	ENST00000557702	MIA3	Q5JRA6	1907 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	CCDC195	A0A1B0GUA6	201 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	ANHX	E9PGG2	379 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	LAMP2	P13473	410 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZSCAN20	P17040	1043 aa	Predicted RBP	10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	GPC5	P78333	572 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	DSC3	Q14574	896 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZBTB41	Q5SVQ8	909 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	PCNX4	Q63HM2	1172 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	MTHFD1L	Q6UB35	978 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	PRR23B	Q6ZRT6	265 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	FAM228A	Q86W67	206 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	IQCA1	Q86XH1	822 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	MIER1	Q8N108	512 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	RNF169	Q8NCN4	708 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	TRAPPC12	Q8WVT3	735 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	MTMR8	Q96EF0	704 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	CDHR1	Q96JP9	859 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	KLHL5	Q96PQ7	755 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	MRPL9	Q9BYD2	267 aa	Known RBP	10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	NUMBL	Q9Y6R0	609 aa		10.8	□□□□□ -0.68
PABPN1-208	ENST00000557702	C2orf16	Q68DN1	1984 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	KLRF2	D3W0D1	207 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	NCAM2	O15394	837 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	ATP9A	O75110	1047 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	KCNA2	P16389	499 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	KLRC1	P26715	233 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	HAND2	P61296	217 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	RING1	Q06587	406 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	HTR4	Q13639	388 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	WTAP	Q15007	396 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	MLF2	Q15773	248 aa	Predicted RBP	10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	SLC44A4	Q53GD3	710 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	CLLU1OS	Q5K130	101 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	ELMSAN1	Q6PJG2	1045 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	ECHDC2	Q86YB7	292 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	KIAA0319L	Q8IZA0	1049 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	IGSF21	Q96ID5	467 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	PCYT2	Q99447	389 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	RHOBTB2	Q9BYZ6	727 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	RNF41	Q9H4P4	317 aa	Predicted RBP	10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	PRMT8	Q9NR22	394 aa	Predicted RBP	10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	DPP7	Q9UHL4	492 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	LHX6	Q9UPM6	363 aa		10.79	□□□□□ -0.68
PABPN1-208	ENST00000557702	DOCK8	Q8NF50	2099 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	TMEM8B	A6NDV4	472 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	CNP	P09543	421 aa	Known RBP	10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	CRYBB1	P53674	252 aa	Predicted RBP	10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	PPP2R5D	Q14738	602 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	TMEM173	Q86WV6	379 aa	Predicted RBP	10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	STAG2	Q8N3U4	1231 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	HELQ	Q8TDG4	1101 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	SMG7	Q92540	1137 aa	Known RBP	10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	CLDN23	Q96B33	292 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	GPRASP2	Q96D09	838 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	NELL2	Q99435	816 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	OSMR	Q99650	979 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	PIDD1	Q9HB75	910 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	LTB4R2	Q9NPC1	389 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	MAN1C1	Q9NR34	630 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZBTB40	Q9NUA8	1239 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	STK39	Q9UEW8	545 aa		10.78	□□□□□ -0.68
PABPN1-208	ENST00000557702	SRRM3	A6NNA2	597 aa	Predicted RBP	10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	INPPL1	O15357	1258 aa		10.77	□□□□□ -0.69

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