RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 HIP1RO75146 1068 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 ITGB8P26012 769 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 CNNM3Q8NE01 707 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 MCPH1Q8NEM0 835 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 PRPF31Q8WWY3 499 aaKnown RBP16.96■□□□□ 0.31
NEDD1-213ENST00000557644 DDX12PQ92771 950 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
NEDD1-213ENST00000557644 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
NEDD1-213ENST00000557644 POLR3FQ9H1D9 316 aaPredicted RBP16.96■□□□□ 0.31
NEDD1-213ENST00000557644 DACT1Q9NYF0 836 aa16.96■□□□□ 0.31
NEDD1-213ENST00000557644 TNRC18O15417 2968 aaPredicted RBP16.95■□□□□ 0.3
NEDD1-213ENST00000557644 EVI5O60447 810 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 CKBP12277 381 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 GUCY2CP25092 1073 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 MAPK7Q13164 816 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 KRBA2Q6ZNG9 492 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 RHPN2Q8IUC4 686 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 EXOC8Q8IYI6 725 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 ASAP3Q8TDY4 903 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 PAGE5Q96GU1 130 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 BLZF1Q9H2G9 400 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 GINS2Q9Y248 185 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 CYP2C18P33260 490 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 ARL2P36404 184 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 DNM2P50570 870 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 GIT2Q14161 759 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 PSPC1Q8WXF1 523 aaKnown RBP16.95■□□□□ 0.3
NEDD1-213ENST00000557644 BSNDQ8WZ55 320 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 MAP7D2Q96T17 732 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 CDHR5Q9HBB8 845 aa16.95■□□□□ 0.3
NEDD1-213ENST00000557644 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
NEDD1-213ENST00000557644 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
NEDD1-213ENST00000557644 IER5Q5VY09 327 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 DNAJC19Q96DA6 116 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 USP25Q9UHP3 1055 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 CHRNA1P02708 482 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 GLRA2P23416 452 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 CCL23P55773 120 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 NLRP11P59045 1033 aaKnown RBP16.94■□□□□ 0.3
NEDD1-213ENST00000557644 LAMTOR4Q0VGL1 99 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 CUL4BQ13620 913 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 TRAF7Q6Q0C0 670 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 RPAINQ86UA6 219 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 CAGE1Q8TC20 777 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 TCP11Q8WWU5 503 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 COL4A3BPQ9Y5P4 624 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 LOXHD1Q8IVV2 1947 aa16.94■□□□□ 0.3
NEDD1-213ENST00000557644 GPR32O75388 356 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 PRR29P0C7W0 189 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 SYN1P17600 705 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 RSPH3Q86UC2 560 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 NME8Q8N427 588 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 WNT8AQ9H1J5 351 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 MAGEF1Q9HAY2 307 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 CDY2AQ9Y6F7 541 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 SRGAP2CP0DJJ0 459 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 GPC3P51654 580 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 MRPS6P82932 125 aaKnown RBP16.93■□□□□ 0.3
NEDD1-213ENST00000557644 BFSP2Q13515 415 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 ERCC4Q92889 916 aaPredicted RBP16.93■□□□□ 0.3
NEDD1-213ENST00000557644 SCLYQ96I15 445 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 ADAMTS10Q9H324 1103 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 ZHX3Q9H4I2 956 aa16.93■□□□□ 0.3
NEDD1-213ENST00000557644 ZMYND8Q9ULU4 1186 aaPredicted RBP16.93■□□□□ 0.3
NEDD1-213ENST00000557644 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 KIAA0355O15063 1070 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
NEDD1-213ENST00000557644 CSDE1O75534 798 aaKnown RBP16.92■□□□□ 0.3
NEDD1-213ENST00000557644 RBL2Q08999 1139 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 MGAT3Q09327 533 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 CAPSQ13938 189 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 TMEM40Q8WWA1 233 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 KIFAP3Q92845 792 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 OSMRQ99650 979 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 KIFC3Q9BVG8 833 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 A0A087WZ62 844 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 IDEP14735 1019 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 SELPP16109 830 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 AMPD3Q01432 767 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 MBTPS1Q14703 1052 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 LRRC8DQ7L1W4 858 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 RNF149Q8NC42 400 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 NLRP7Q8WX94 980 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
NEDD1-213ENST00000557644 FDXACB1Q9BRP7 624 aaPredicted RBP16.92■□□□□ 0.3
NEDD1-213ENST00000557644 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
NEDD1-213ENST00000557644 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 RAG1P15918 1043 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 PEX3P56589 373 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms