RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 DTX1Q86Y01 620 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 CILP2Q8IUL8 1156 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 NLGN2Q8NFZ4 835 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TSPEARQ8WU66 669 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 ASB15Q8WXK1 588 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 LINC01599Q8WXQ3 324 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 FOXRED1Q96CU9 486 aaPredicted RBP3.91□□□□□ -1.78
TRAV28-201ENST00000557548 C1GALT1C1Q96EU7 318 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 RAX2Q96IS3 184 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 GBP4Q96PP9 640 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TUBGCP5Q96RT8 1024 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TBCBQ99426 244 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TMEM60Q9H2L4 133 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 BHMT2Q9H2M3 363 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 RC3H2Q9HBD1 1191 aaKnown RBP3.91□□□□□ -1.78
TRAV28-201ENST00000557548 IFT122Q9HBG6 1241 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 ASH2LQ9UBL3 628 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 POLHQ9Y253 713 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 SIT1Q9Y3P8 196 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 PCDHB4Q9Y5E5 795 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 SNX11Q9Y5W9 270 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 TAF6LQ9Y6J9 622 aa3.91□□□□□ -1.78
TRAV28-201ENST00000557548 ST20-MTHFSA0A0A6YYL1 179 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 KLRG2A4D1S0 409 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 F5H423 210 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ACOT7O00154 380 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 GSC2O15499 205 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PIP5K1CO60331 668 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 TADA3O75528 432 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PRPF6O94906 941 aaKnown RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 TGFB1P01137 390 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PRLP01236 227 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ALDH2P05091 517 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ZKSCAN1P17029 563 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 JUNBP17275 347 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 HALP42357 657 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 KIR2DL1P43626 348 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 KIR2DL2P43627 348 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 SLC6A11P48066 632 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 TM4SF4P48230 202 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 POU5F1BQ06416 359 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 IKZF1Q13422 519 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 SEMA5AQ13591 1074 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 TRIM25Q14258 630 aaKnown RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 AOC3Q16853 763 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PGS1Q32NB8 556 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 TTC38Q5R3I4 469 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ZFYVE27Q5T4F4 411 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PRAMEF9Q5VWM5 478 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 TIGD7Q6NT04 549 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 DARS2Q6PI48 645 aaKnown RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 NPNTQ6UXI9 565 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 CABP7Q86V35 215 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PRR18Q8N4B5 295 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 HIPK4Q8NE63 616 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ACRBPQ8NEB7 543 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 NUP43Q8NFH3 380 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PHOSPHO1Q8TCT1 267 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 POF1BQ8WVV4 589 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ASB11Q8WXH4 323 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 CLEC4DQ8WXI8 215 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 RIN2Q8WYP3 895 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 HRASLS5Q96KN8 279 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 CCDC138Q96M89 665 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 NAP1L4Q99733 375 aaKnown RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ACE2Q9BYF1 805 aaPredicted RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 CARS2Q9HA77 564 aaKnown RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 RSAD1Q9HA92 442 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 PDLIM7Q9NR12 457 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 RTEL1Q9NZ71 1219 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 LUZP4Q9P127 313 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 ZC3H7BQ9UGR2 993 aaKnown RBP3.9□□□□□ -1.79
TRAV28-201ENST00000557548 LIMCH1Q9UPQ0 1083 aa3.9□□□□□ -1.79
TRAV28-201ENST00000557548 A0A1W2PQJ5 194 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PRAMEF22A3QJZ6 481 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 CCDC154A6NI56 674 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 GOLIM4O00461 696 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 HTRA2O43464 458 aaPredicted RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 IGLV1-40P01703 118 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 ZGLP1P0C6A0 271 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PRKCAP17252 672 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 EDNRBP24530 442 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 HTR1BP28222 390 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PEX2P28328 305 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 MC4RP32245 332 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 CD96P40200 585 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PPM1FP49593 454 aaPredicted RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 BCAR1P56945 870 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 SLC6A3Q01959 620 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PPARAQ07869 468 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 ADCY2Q08462 1091 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 IFIT5Q13325 482 aaKnown RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 SLC14A2Q15849 920 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 C3orf36Q3SXR2 165 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 RALGPS1Q5JS13 557 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PRAMEF18Q5VWM3 479 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 SLFN12LQ6IEE8 588 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 KIAA1841Q6NSI8 718 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms