RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CPZQ66K79 652 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 NBPF11Q86T75 865 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 C7orf31Q8N865 590 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SMARCC2Q8TAQ2 1214 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 COG1Q8WTW3 980 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 TSPEARQ8WU66 669 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 GFM2Q969S9 779 aaKnown RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SLC39A13Q96H72 371 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 TCEAL9Q9UHQ7 104 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SYNPO2Q9UMS6 1093 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 FAN1Q9Y2M0 1017 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 CFAP20Q9Y6A4 193 aaKnown RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 WNT3AP56704 352 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 EVA1CP58658 441 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 ADAM8P78325 824 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 GRIN1Q05586 938 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 MGAT2Q10469 447 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 RTP5Q14D33 572 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 TMEM132BQ14DG7 1078 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 DGKDQ16760 1214 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 GAGE13Q4V321 117 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 PRR23BQ6ZRT6 265 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 Q6ZUG5 572 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 CHST15Q7LFX5 561 aaPredicted RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 OR5AN1Q8NGI8 311 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 MBD6Q96DN6 1003 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SEMA4AQ9H3S1 761 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 VTA1Q9NP79 307 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 LUC7LQ9NQ29 371 aaKnown RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 DDX21Q9NR30 783 aaKnown RBP eCLIP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 C14orf119Q9NWQ9 140 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SIRT5Q9NXA8 310 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 DBR1Q9UK59 544 aaKnown RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 ADAM29Q9UKF5 820 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 A0A0G2JNJ9 132 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SCO2A0A1W2PP80 73 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 H0Y858 1186 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 MCAMP43121 646 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 MAP3K12Q12852 859 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 ATAT1Q5SQI0 421 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 ZBTB46Q86UZ6 589 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 CHPFQ8IZ52 775 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 JDP2Q8WYK2 163 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 RTF1Q92541 710 aaKnown RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 JADE3Q92613 823 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 TUBGCP5Q96RT8 1024 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 YIPF4Q9BSR8 244 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SLC12A5Q9H2X9 1139 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 Q9UFV3 132 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 CTDP1Q9Y5B0 961 aaPredicted RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 HCFC2Q9Y5Z7 792 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 PRAMEF25A6NGN4 478 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 GOLGA8AA7E2F4 631 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 GOLGA8BA8MQT2 603 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ARIH2O95376 493 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PLA2G1BP04054 148 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 NRG3P56975 720 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PPP2R5AQ15172 486 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 CLEC14AQ86T13 490 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SIRT2Q8IXJ6 389 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FAM26EQ8N5C1 309 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ZCCHC14Q8WYQ9 949 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 LIN37Q96GY3 246 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 HIST1H2AHQ96KK5 128 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 HIST1H2AJQ99878 128 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 MYL10Q9BUA6 226 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 NSUN3Q9H649 340 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 GREM2Q9H772 168 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 IFT122Q9HBG6 1241 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 POLR3BQ9NW08 1133 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 CALCOCO1Q9P1Z2 691 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ARHGAP28Q9P2N2 729 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SAE1Q9UBE0 346 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FRS3O43559 492 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PHF2O75151 1096 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FARP2O94887 1054 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FSBPO95073 299 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 GASTP01350 101 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 LTA4HP09960 611 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 MC4RP32245 332 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 CSF2RBP32927 897 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ADRM1Q16186 407 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ZNF385BQ569K4 471 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FAM129CQ86XR2 697 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 AMOTL1Q8IY63 956 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 HIPK4Q8NE63 616 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 COA7Q96BR5 231 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SLC7A6OSQ96CW6 309 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 TEKT5Q96M29 485 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SEC61A2Q9H9S3 476 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ARHGAP20Q9P2F6 1191 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 IPPQ9Y573 584 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PCDHB6Q9Y5E3 794 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FAM171A2A8MVW0 826 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 RFXAPO00287 272 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SNUPNO95149 360 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms