RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 TCP11Q8WWU5 503 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 NLRP7Q8WX94 980 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 PSPC1Q8WXF1 523 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 APBB2Q92870 758 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 TMEM143Q96AN5 459 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 CDHR5Q9HBB8 845 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 SQORQ9Y6N5 450 aa11.79□□□□□ -0.52
HNRNPC-232ENST00000557442 TRIP11Q15643 1979 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 SOX1O00570 391 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 TRANK1O15050 2925 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 EFCAB14O75071 495 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 BRD1O95696 1058 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 UBA7P41226 1012 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 NASPP49321 788 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 FAM109BQ6ICB4 259 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 NLRP4Q96MN2 994 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 PLIN2Q99541 437 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 NT5C3AQ9H0P0 336 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 BHMT2Q9H2M3 363 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 XPNPEP1Q9NQW7 623 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 CHD7Q9P2D1 2997 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 COL4A3BPQ9Y5P4 624 aa11.78□□□□□ -0.52
HNRNPC-232ENST00000557442 CITO14578 2027 aa11.77□□□□□ -0.52
HNRNPC-232ENST00000557442 CDH23Q9H251 3354 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 A0A087WZ62 844 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 GRXCR1A8MXD5 290 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 E9PMD0 336 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 YEATS4O95619 227 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 ATP2A2P16615 1042 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 DEFB103AP81534 67 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 CDC42EP1Q00587 391 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 GRB10Q13322 594 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 SPECC1Q5M775 1068 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 HYIQ5T013 277 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 ZNF410Q86VK4 478 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 MCPH1Q8NEM0 835 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 CALML4Q96GE6 196 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 LRCH3Q96II8 777 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 PNMA5Q96PV4 448 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 FDXACB1Q9BRP7 624 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 CSRNP2Q9H175 543 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 PADI3Q9ULW8 664 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 DNM3Q9UQ16 869 aa11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 NOC2LQ9Y3T9 749 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-232ENST00000557442 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 GPR182O15218 404 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 SPTLC2O15270 562 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 SLC26A4O43511 780 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 EYA4O95677 639 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 AMHP03971 560 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 DARSP14868 501 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 EIF4BP23588 611 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 TXLNAP40222 546 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 DNM1Q05193 864 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 KARSQ15046 597 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 TMEM119Q4V9L6 283 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.76□□□□□ -0.534e-7■■■■□ 21.4
HNRNPC-232ENST00000557442 MAEAQ7L5Y9 396 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 KCNK18Q7Z418 384 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 TMCO2Q7Z6W1 182 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 FAM228AQ86W67 206 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 CLIC6Q96NY7 704 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 FTHL17Q9BXU8 183 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 GCOM2Q9BZD3 368 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 POLR3FQ9H1D9 316 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 ERVK-5Q9HDB9 667 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 GPRC5CQ9NQ84 441 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms